Package: GWASinspector 1.7.1

Alireza Ani

GWASinspector: Comprehensive and Easy to Use Quality Control of GWAS Results

When evaluating the results of a genome-wide association study (GWAS), it is important to perform a quality control to ensure that the results are valid, complete, correctly formatted, and, in case of meta-analysis, consistent with other studies that have applied the same analysis. This package was developed to facilitate and streamline this process and provide the user with a comprehensive report.

Authors:Alireza Ani [aut, cre], Peter J. van der Most [aut], Ahmad Vaez [aut], Ilja M. Nolte [aut]

GWASinspector_1.7.1.tar.gz
GWASinspector_1.7.1.tar.gz(r-4.5-noble)GWASinspector_1.7.1.tar.gz(r-4.4-noble)
GWASinspector_1.7.1.tgz(r-4.4-emscripten)GWASinspector_1.7.1.tgz(r-4.3-emscripten)
GWASinspector.pdf |GWASinspector.html
GWASinspector/json (API)
NEWS

# Install 'GWASinspector' in R:
install.packages('GWASinspector', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.00 score 4 scripts 535 downloads 1 mentions 9 exports 77 dependencies

Last updated 7 months agofrom:b8c9ac05ea. Checks:OK: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 03 2024
R-4.5-linuxOKNov 03 2024

Exports:compare_GWASsdemo_inspectorget_configget_headerTranslationmanhattan_plotresult_inspectorrun_inspectorsetup_inspectorsystem_check

Dependencies:base64encbitbit64blobbslibcachemclicolorspacecpp11data.tableDBIdigestevaluatefansifarverfastmapfontawesomeformatRfsfutile.loggerfutile.optionsggplot2gluegridExtragtablehashhighrhtmltoolsiniisobandjquerylibjsonlitekableExtraknitrlabelinglambda.rlatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeopenxlsxpillarpkgconfigplogrR.methodsS3R.ooR.utilsR6rappdirsRColorBrewerRcpprlangrmarkdownRSQLiterstudioapisassscalesstringistringrsvglitesystemfontstibbletinytexutf8vctrsviridisLitewithrxfunxml2yamlzip

Introduction to GWASinspector

Rendered fromGWASinspector.Rmdusingknitr::rmarkdownon Nov 03 2024.

Last update: 2023-09-27
Started: 2019-08-02