Package: swfscAirDAS 0.3.1

Sam Woodman

swfscAirDAS: Southwest Fisheries Science Center Aerial DAS Data Processing

Process and summarize aerial survey 'DAS' data (AirDAS) <https://swfsc-publications.fisheries.noaa.gov/publications/TM/SWFSC/NOAA-TM-NMFS-SWFSC-185.PDF> collected using an aerial survey program from the Southwest Fisheries Science Center (SWFSC) <https://www.fisheries.noaa.gov/west-coast/science-data/california-current-marine-mammal-assessment-program>. PDF files detailing the relevant AirDAS data formats are included in this package.

Authors:Sam Woodman [aut, cre]

swfscAirDAS_0.3.1.tar.gz
swfscAirDAS_0.3.1.tar.gz(r-4.5-noble)swfscAirDAS_0.3.1.tar.gz(r-4.4-noble)
swfscAirDAS_0.3.1.tgz(r-4.4-emscripten)swfscAirDAS_0.3.1.tgz(r-4.3-emscripten)
swfscAirDAS.pdf |swfscAirDAS.html
swfscAirDAS/json (API)
NEWS

# Install 'swfscAirDAS' in R:
install.packages('swfscAirDAS', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/swfsc/swfscairdas/issues

Uses libs:
  • jags– Just Another Gibbs Sampler for Bayesian MCMC
  • c++– GNU Standard C++ Library v3

2.70 score 7 scripts 300 downloads 15 exports 87 dependencies

Last updated 2 months agofrom:a25cb2f66f. Checks:OK: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKNov 03 2024
R-4.5-linuxOKNov 03 2024

Exports:airdas_checkairdas_chop_conditionairdas_chop_equallengthairdas_chop_sectionairdas_commentsairdas_comments_processairdas_effortairdas_effort_sightairdas_format_pdfairdas_processairdas_readairdas_segdataairdas_sightas_airdas_dfas_airdas_dfr

Dependencies:abindbitbit64classclassIntclicliprclueclustercodacolorspacecpp11crayonDBIdeldirdplyre1071fansifarverfBasicsgenericsggplot2ggrepelgluegssgtableHDIntervalhmsigraphisobandKernSmoothkknnlabelinglatticelifecyclelubridatemagrittrMASSMatrixmgcvmodeestmunsellnlmepillarpkgconfigpolyclipprettyunitsprogressproxypurrrR6RColorBrewerRcppreadrrlangrmutilrpartrunjagss2scalessfspatialspatstat.dataspatstat.geomspatstat.univarspatstat.utilsstablestablediststatipstringistringrswfscDASswfscMisctibbletidyrtidyselecttimechangetimeDatetimeSeriestzdbunitsutf8vctrsviridisLitevroomwithrwk

Introduction to swfscAirDAS

Rendered fromswfscAirDAS.Rmdusingknitr::rmarkdownon Nov 03 2024.

Last update: 2024-10-04
Started: 2020-09-07

Readme and manuals

Help Manual

Help pageTopics
Southwest Fisheries Science Center Aerial Survey DASswfscAirDAS-package swfscAirDAS
Check AirDAS fileairdas_check
Chop AirDAS data - conditionairdas_chop_condition airdas_chop_condition.airdas_df airdas_chop_condition.data.frame
Chop AirDAS data - equal lengthairdas_chop_equallength airdas_chop_equallength.airdas_df airdas_chop_equallength.data.frame
Chop AirDAS data - sectionairdas_chop_section airdas_chop_section.airdas_df airdas_chop_section.data.frame
Extract comments from AirDAS dataairdas_comments airdas_comments.airdas_df airdas_comments.airdas_dfr airdas_comments.data.frame
Process comments in AirDAS dataairdas_comments_process airdas_comments_process.airdas_df airdas_comments_process.airdas_dfr airdas_comments_process.data.frame
'airdas_df' classairdas_df airdas_df-class
'airdas_dfr' classairdas_dfr airdas_dfr-class
Summarize AirDAS effortairdas_effort airdas_effort.airdas_df airdas_effort.data.frame
Summarize AirDAS sightings by effort segmentairdas_effort_sight
Aerial DAS format requirementsairdas_format_pdf
Process aerial survey DAS dataairdas_process airdas_process.airdas_dfr airdas_process.character airdas_process.data.frame
Read AirDAS file(s)airdas_read
Summarize AirDAS data for a continuous effort sectionairdas_segdata airdas_segdata.airdas_df airdas_segdata.data.frame
Aerial DAS sightingsairdas_sight airdas_sight.airdas_df airdas_sight.data.frame
Coerce object to a airdas_df objectas_airdas_df as_airdas_df.airdas_df as_airdas_df.data.frame
Coerce object to a airdas_dfr objectas_airdas_dfr as_airdas_dfr.airdas_dfr as_airdas_dfr.data.frame
Subsetting objects created using swfscAirDAS$<-.airdas_df $<-.airdas_dfr subsetting [.airdas_df [.airdas_dfr [<-.airdas_df [<-.airdas_dfr [[<-.airdas_df [[<-.airdas_dfr