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Package: sfinx 1.7.99
Kevin Titeca
sfinx: Straightforward Filtering Index for AP-MS Data Analysis (SFINX)
The straightforward filtering index (SFINX) identifies true positive protein interactions in a fast, user-friendly, and highly accurate way. It is not only useful for the filtering of affinity purification - mass spectrometry (AP-MS) data, but also for similar types of data resulting from other co-complex interactomics technologies, such as TAP-MS, Virotrap and BioID. SFINX can also be used via the website interface at <http://sfinx.ugent.be>.
Authors:
sfinx_1.7.99.tar.gz
sfinx_1.7.99.tar.gz(r-4.7-any)sfinx_1.7.99.tar.gz(r-4.6-any)
sfinx_1.7.99.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
sfinx/json (API)
| # Install 'sfinx' in R: |
| install.packages('sfinx', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- BaitIdentityExampleFile - A vector with proteins of interest (baits) for the TIP49 dataset.
- DataInputExampleFile - The TIP49 dataset of protein interactions (AP-MS).
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:e88d15b385. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 151 | ||
| source / vignettes | OK | 137 | ||
| linux-release-x86_64 | OK | 118 | ||
| wasm-release | OK | 109 |
Exports:sfinx
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| A vector with proteins of interest (baits) for the TIP49 dataset. | BaitIdentityExampleFile |
| The TIP49 dataset of protein interactions (AP-MS). | DataInputExampleFile |
| SFINX (Straightforward Filtering INdeX). | sfinx |