{ "_id": "6ab7a16f99f7aa8c6aa331c7", "Package": "sfinx", "Type": "Package", "Title": "Straightforward Filtering Index for AP-MS Data Analysis (SFINX)", "Version": "1.7.99", "Date": "2017-07-19", "Authors@R": "c( person(\"Kevin\", \"Titeca\", email = \"sfinxinteractomics@gmail.com\", role = c(\"aut\", \"cre\")),\nperson(\"Jan\", \"Tavernier\", role = \"ths\"),\nperson(\"Sven\", \"Eyckerman\", role = \"ths\"))", "Description": "The straightforward filtering index (SFINX) identifies\ntrue positive protein interactions in a fast, user-friendly,\nand highly accurate way. It is not only useful for the\nfiltering of affinity purification - mass spectrometry (AP-MS)\ndata, but also for similar types of data resulting from other\nco-complex interactomics technologies, such as TAP-MS, Virotrap\nand BioID. SFINX can also be used via the website interface at\n.", "License": "Apache License 2.0", "LazyData": "TRUE", "URL": "http://sfinx.ugent.be", "RoxygenNote": "5.0.1", "VignetteBuilder": "knitr", "NeedsCompilation": "no", "Packaged": { "Date": "2026-09-26 10:39:03 UTC", "User": "root" }, "Author": "Kevin Titeca [aut, cre], Jan Tavernier [ths], Sven Eyckerman\n[ths]", "Maintainer": "Kevin Titeca ", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2017-07-19 19:55:19 UTC", "RemoteUrl": "https://github.com/cran/sfinx", "RemoteRef": "HEAD", "RemoteSha": "e88d15b3850654561c531b8fc5afe0e6d23245a1", "_user": "cran", "_type": "src", "_file": "sfinx_1.7.99.tar.gz", "_fileid": "https://r2.ropensci.org/9d0a6e659134799a7a37b63d0c6bf507eabdaf1a7b3115ff03642c3ef2845987", "_filesize": 139110, "_sha256": "9d0a6e659134799a7a37b63d0c6bf507eabdaf1a7b3115ff03642c3ef2845987", "_expires": "2027-01-04T10:41:49.000Z", "_created": "2026-09-26T10:39:03.000Z", "_published": "2026-09-26T10:41:51.649Z", "_jobs": [ { "job": 108388971606, "time": 126, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "10903854662" }, { "job": 108388971615, "time": 123, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "10904277809" }, { "job": 108388456392, "time": 221, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "10903289838" }, { "job": 108388971624, "time": 92, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "10904267841" }, { "job": 108388971617, "time": 72, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "10903949077" }, { "job": 108388971635, "time": 68, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "10904337483" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/cran/actions/runs/36236240866", "_status": "success", "_upstream": "https://github.com/cran/sfinx", "_commit": { "id": "e88d15b3850654561c531b8fc5afe0e6d23245a1", "author": "Kevin Titeca ", "committer": "cran-robot ", "message": "version 1.7.99\n", "time": 1500494119 }, "_maintainer": { "name": "Kevin Titeca", "email": "sfinxinteractomics@gmail.com" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.2.3", "role": "Depends" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "role": "Suggests" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "followers": 630, "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 221, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/sfinx" }, "_searchresults": 10, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/readme.html", "extra/readme.md", "extra/sfinx.html" ], "_realowner": "cran", "_cranurl": false, "_releases": [ { "version": "1.7.0", "date": "2016-06-13" }, { "version": "1.7.9", "date": "2016-12-22" }, { "version": "1.7.99", "date": "2017-07-19" } ], "_exports": [ "sfinx" ], "_datasets": [ { "name": "BaitIdentityExampleFile", "title": "A vector with proteins of interest (baits) for the TIP49 dataset.", "object": "BaitIdentityExampleFile", "class": [ "character" ], "fields": [], "table": false, "tojson": true }, { "name": "DataInputExampleFile", "title": "The TIP49 dataset of protein interactions (AP-MS).", "object": "DataInputExampleFile", "class": [ "matrix", "array" ], "fields": [ "ARP5", "ARP6_1", "ARP6_2", "ARP6_3", "ARP8_1", "ARP8_2", "BC014022", "DPCD", "FLJ90652", "FLJ20729", "FLJ20643", "FLJ20436", "FLJ20309", "H2AZ", "Ies2", "Ies6", "KIAA0515", "Lin9", "MRGBP_1", "MRGBP_2", "NUFIP_1", "NUFIP_2", "p53.DNA.DRP", "RPB5MP", "SRCAP_1", "SRCAP_2", "TCF3.Amida", "TIP49a", "TIP49b", "UTX1", "YL1_1", "YL1_2", "ZnF.HIT1.VPS71_1", "ZnF.HIT1.VPS71_2", "ZnF.HIT2", "HsHeLa_FLAG.IP_Ti_1", "HsHela_FLAG.IP_Ti_2", "HsHeLa_FLAG.IP_Ti_3", "HsHeLa_FLAG.IP_Ti_4", "HsHela_FLAG.IP_Ti_5", "HsHela_FLAG.IP_NE_Ti_1", "HsHela_FLAG.IP_NE_Ti_3", "HsHela_FLAG.IP_NE_Ti_4", "HsHela_FLAG.IP_NE_Ti_5", "HsHeLa_FLAG.IP_S100_Ti_1", "HsHela_FLAG.IP_S100_Ti_2", "HsHela_FLAG.IP_S100_Ti_3", "HsHela_FLAG.IP_S100_Ti_4", "HsHela_FLAG.IP_S100_Ti_5", "HsHela_FLAG.IP_S100_Ti_6", "HsHela_FLAG.IP_150mM_Ti_1", "HsHela_FLAG.IP_300mM_Ti_1", "HsHela_FLAG.IP_300mM_Ti_2", "HsHeLa_FLAG.IP_MG_Ti_1", "HsHeLa_FLAG.IP_MG_Ti_2", "Hs293_FLAG.IP_Ti_1", "Hs293_FLAG.IP_Ti_2", "Hs293_FLAG.IP_Ti_3", "Hs293_FLAG.IP_Ti_4", "Hs293_FLAG.IP_Ti_5", "Hs293_FLAG.IP_Ti_6", "Hs293_FLAG.IP_Ti_7", "Hs293_FLAG.IP_MG_Ti_1", "Hs293_FLAG.IP_MG_Ti_2", "Hs293_FLAG.IP_MG_Ti_3", "Hs293_FLAG.IP_MG_Ti_4", "Hs293_FLAG.IP_MG_Ti_5", "HsHela_GST.IP_Ti_1", "HsHela_GST.IP_Ti_2", "HsHela_GST.IP_Ti_3" ], "rows": 1581, "table": true, "tojson": true } ], "_help": [ { "page": "BaitIdentityExampleFile", "title": "A vector with proteins of interest (baits) for the TIP49 dataset.", "topics": [ "BaitIdentityExampleFile" ] }, { "page": "DataInputExampleFile", "title": "The TIP49 dataset of protein interactions (AP-MS).", "topics": [ "DataInputExampleFile" ] }, { "page": "sfinx", "title": "SFINX (Straightforward Filtering INdeX).", "topics": [ "sfinx" ] } ], "_readme": "https://github.com/cran/sfinx/raw/HEAD/README.md", "_rundeps": [], "_vignettes": [ { "source": "sfinx-vignette.Rmd", "filename": "sfinx-vignette.html", "title": "SFINX (Straightforward Filtering INdeX)", "author": "Kevin Titeca", "engine": "knitr::rmarkdown", "headings": [ "Context", "Access", "Examples", "More information" ], "created": "2016-06-13 17:10:32", "modified": "2016-12-22 23:07:04", "commits": 2 } ], "_score": 2.6989700043360187, "_indexed": true, "_nocasepkg": "sfinx", "_universes": [ "cran" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.7.99", "date": "2026-09-26T10:41:14.000Z", "distro": "resolute", "commit": "e88d15b3850654561c531b8fc5afe0e6d23245a1", "fileid": "https://r2.ropensci.org/b7ef5fe8d0db0d968aaabb950db62889a6cf89e3af54ded7398f4f2240fceee8", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/36236240866" }, { "r": "4.6.1", "os": "linux", "version": "1.7.99", "date": "2026-09-26T10:41:14.000Z", "distro": "resolute", "commit": "e88d15b3850654561c531b8fc5afe0e6d23245a1", "fileid": "https://r2.ropensci.org/be471476ef57110ab335129084ff094df6a8939d753b9ce05515e166a3fc48ff", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/36236240866" }, { "r": "4.6.0", "os": "wasm", "version": "1.7.99", "date": "2026-09-26T10:40:55.000Z", "commit": "e88d15b3850654561c531b8fc5afe0e6d23245a1", "fileid": "https://r2.ropensci.org/2326ccab55b81c903010ba78e049446d16b786506cd16e5ce83e9e01bf39fade", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/36236240866" }, { "r": "4.7.0", "os": "win", "version": "1.7.99", "date": "2026-09-26T10:40:17.000Z", "commit": "e88d15b3850654561c531b8fc5afe0e6d23245a1", "fileid": "https://r2.ropensci.org/bdce12a9e5ffe1f9c1c4479f7ed63f6cb3cbb585cafd59b8df89812d0424dc20", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/36236240866" }, { "r": "4.6.1", "os": "win", "version": "1.7.99", "date": "2026-09-26T10:40:16.000Z", "commit": "e88d15b3850654561c531b8fc5afe0e6d23245a1", "fileid": "https://r2.ropensci.org/56d90c4c8aeabbb30738057c510e2be0646061e870c50c219a2e297e4ebc0363", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/36236240866" } ] }