Package: o2plsda 0.0.26

Kai Guo

o2plsda: Multiomics Data Integration

Provides functions to do 'O2PLS-DA' analysis for multiple omics data integration. The algorithm came from "O2-PLS, a two-block (X±Y) latent variable regression (LVR) method with an integral OSC filter" which published by Johan Trygg and Svante Wold at 2003 <doi:10.1002/cem.775>. 'O2PLS' is a bidirectional multivariate regression method that aims to separate the covariance between two data sets (it was recently extended to multiple data sets) (Löfstedt and Trygg, 2011 <doi:10.1002/cem.1388>; Löfstedt et al., 2012 <doi:10.1016/j.aca.2013.06.026>) from the systematic sources of variance being specific for each data set separately.

Authors:Kai Guo [aut, cre], Junguk Hur [aut], Eva Feldman [aut]

o2plsda_0.0.26.tar.gz
o2plsda_0.0.26.tar.gz(r-4.7-arm64)o2plsda_0.0.26.tar.gz(r-4.7-x86_64)o2plsda_0.0.26.tar.gz(r-4.6-arm64)o2plsda_0.0.26.tar.gz(r-4.6-x86_64)
o2plsda_0.0.26.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
o2plsda/json (API)

# Install 'o2plsda' in R:
install.packages('o2plsda', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

openblascppopenmp

2.32 score 21 scripts 261 downloads 7 exports 28 dependencies

Last updated from:3c75838940. Checks:6 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-arm64OK188
linux-devel-x86_64OK144
source / vignettesOK276
linux-release-arm64OK150
linux-release-x86_64OK153
wasm-releaseOK124

Exports:loadingso2cvo2plsoplsdaplsdascoresvip

Dependencies:clicpp11dplyrfarvergenericsggplot2ggrepelgluegtableisobandlabelinglifecyclemagrittrpillarpkgconfigR6RColorBrewerRcppRcppArmadillorlangS7scalestibbletidyselectutf8vctrsviridisLitewithr

Omics data integration with o2plsda

Rendered fromo2plsda.Rmdusingknitr::knitron Jun 08 2026.

Last update: 2025-12-01
Started: 2021-11-19