Package: mpwR 0.1.5
Oliver Kardell
mpwR: Standardized Comparison of Workflows in Mass Spectrometry-Based Bottom-Up Proteomics
Useful functions to analyze proteomic workflows including number of identifications, data completeness, missed cleavages, quantitative and retention time precision etc. Various software outputs are supported such as 'ProteomeDiscoverer', 'Spectronaut', 'DIA-NN' and 'MaxQuant'.
Authors:
mpwR_0.1.5.tar.gz
mpwR_0.1.5.tar.gz(r-4.5-noble)mpwR_0.1.5.tar.gz(r-4.4-noble)
mpwR_0.1.5.tgz(r-4.4-emscripten)mpwR_0.1.5.tgz(r-4.3-emscripten)
mpwR.pdf |mpwR.html✨
mpwR/json (API)
NEWS
# Install 'mpwR' in R: |
install.packages('mpwR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 1 years agofrom:34175ea1a4. Checks:OK: 2. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 08 2024 |
R-4.5-linux | OK | Dec 08 2024 |
Exports:create_exampleget_CV_LFQ_pepget_CV_LFQ_pgget_CV_RTget_DC_Reportget_ID_Reportget_MC_Reportget_summary_Reportget_Upset_listload_experimental_designplot_CV_densityplot_DC_barplotplot_DC_stacked_barplotplot_ID_barplotplot_ID_boxplotplot_MC_barplotplot_MC_stacked_barplotplot_radarchartplot_Upsetprepare_mpwRwrite_experimental_designwrite_generic_template
Dependencies:askpassbase64encbslibcachemclicolorspacecomprehenrcpp11crosstalkcurldata.tabledigestdplyrevaluatefansifarverfastmapflowTraceRfontawesomeforcatsfsgenericsggplot2gluegridExtragtablehighrhtmltoolshtmlwidgetshttrisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeopensslpillarpkgconfigplotlyplyrpromisespurrrR6rappdirsRColorBrewerRcpprlangrmarkdownsassscalesstringistringrsystibbletidyrtidyselecttinytexUpSetRutf8vctrsviridisLitewithrxfunyaml
Import
Rendered fromImport.Rmd
usingknitr::rmarkdown
on Dec 08 2024.Last update: 2022-06-22
Started: 2022-06-22
Output Explanations
Rendered fromOutput_Explanations.Rmd
usingknitr::rmarkdown
on Dec 08 2024.Last update: 2023-11-14
Started: 2023-11-14
Requirements
Rendered fromRequirements.Rmd
usingknitr::rmarkdown
on Dec 08 2024.Last update: 2023-11-14
Started: 2022-06-22
Workflow
Rendered fromWorkflow.Rmd
usingknitr::rmarkdown
on Dec 08 2024.Last update: 2022-06-22
Started: 2022-06-22