Package: mixedBayes 0.2.5

Kun Fan

mixedBayes: Bayesian Longitudinal Regularized Quantile Mixed Model

With high-dimensional omics features, repeated measure ANOVA leads to longitudinal gene-environment interaction studies that have intra-cluster correlations, outlying observations and structured sparsity arising from the ANOVA design. In this package, we have developed robust sparse Bayesian mixed effect models tailored for the above studies (Fan et al. (2025) <doi:10.1093/jrsssc/qlaf027>). An efficient Gibbs sampler has been developed to facilitate fast computation. The Markov chain Monte Carlo algorithms of the proposed and alternative methods are efficiently implemented in 'C++'. The development of this software package and the associated statistical methods have been partially supported by an Innovative Research Award from Johnson Cancer Research Center, Kansas State University.

Authors:Kun Fan [aut, cre], Shejuty Devnath [aut], Cen Wu [aut]

mixedBayes_0.2.5.tar.gz
mixedBayes_0.2.5.tar.gz(r-4.7-arm64)mixedBayes_0.2.5.tar.gz(r-4.7-x86_64)mixedBayes_0.2.5.tar.gz(r-4.6-arm64)mixedBayes_0.2.5.tar.gz(r-4.6-x86_64)
mixedBayes_0.2.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
mixedBayes/json (API)
NEWS

# Install 'mixedBayes' in R:
install.packages('mixedBayes', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/kunfa/mixedbayes/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library
Datasets:
  • coeff - Simulated data for demonstrating the features of mixedBayes
  • e - Simulated data for demonstrating the features of mixedBayes
  • g - Simulated data for demonstrating the features of mixedBayes
  • k - Simulated data for demonstrating the features of mixedBayes
  • X - Simulated data for demonstrating the features of mixedBayes
  • y - Simulated data for demonstrating the features of mixedBayes

On CRAN:

Conda:

openblascppopenmp

2.70 score 3 scripts 617 downloads 4 exports 2 dependencies

Last updated from:d9871f06fb. Checks:6 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-arm64OK214
linux-devel-x86_64OK208
source / vignettesOK234
linux-release-arm64OK224
linux-release-x86_64OK202
wasm-releaseOK190

Exports:mixedBayespredict_mixedBayesreformatselection

Dependencies:RcppRcppArmadillo