Package: mixedBayes 0.2.5

Kun Fan
mixedBayes: Bayesian Longitudinal Regularized Quantile Mixed Model
With high-dimensional omics features, repeated measure ANOVA leads to longitudinal gene-environment interaction studies that have intra-cluster correlations, outlying observations and structured sparsity arising from the ANOVA design. In this package, we have developed robust sparse Bayesian mixed effect models tailored for the above studies (Fan et al. (2025) <doi:10.1093/jrsssc/qlaf027>). An efficient Gibbs sampler has been developed to facilitate fast computation. The Markov chain Monte Carlo algorithms of the proposed and alternative methods are efficiently implemented in 'C++'. The development of this software package and the associated statistical methods have been partially supported by an Innovative Research Award from Johnson Cancer Research Center, Kansas State University.
Authors:
mixedBayes_0.2.5.tar.gz
mixedBayes_0.2.5.tar.gz(r-4.7-arm64)mixedBayes_0.2.5.tar.gz(r-4.7-x86_64)mixedBayes_0.2.5.tar.gz(r-4.6-arm64)mixedBayes_0.2.5.tar.gz(r-4.6-x86_64)
mixedBayes_0.2.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
mixedBayes/json (API)
NEWS
| # Install 'mixedBayes' in R: |
| install.packages('mixedBayes', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/kunfa/mixedbayes/issues
- coeff - Simulated data for demonstrating the features of mixedBayes
- e - Simulated data for demonstrating the features of mixedBayes
- g - Simulated data for demonstrating the features of mixedBayes
- k - Simulated data for demonstrating the features of mixedBayes
- X - Simulated data for demonstrating the features of mixedBayes
- y - Simulated data for demonstrating the features of mixedBayes
Last updated from:d9871f06fb. Checks:6 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 214 | ||
| linux-devel-x86_64 | OK | 208 | ||
| source / vignettes | OK | 234 | ||
| linux-release-arm64 | OK | 224 | ||
| linux-release-x86_64 | OK | 202 | ||
| wasm-release | OK | 190 |
Exports:mixedBayespredict_mixedBayesreformatselection
Dependencies:RcppRcppArmadillo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Bayesian Longitudinal Regularized Quantile Mixed Model | mixedBayes-package |
| simulated data for demonstrating the features of mixedBayes | coeff data e g k X y |
| fit a Bayesian longitudinal regularized quantile mixed model | mixedBayes |
| Make predictions from a mixedBayes object | predict_mixedBayes |
| This function changes the format of the longitudinal data from wide format to long format | reformat |
| Variable selection for a mixedBayes object | selection |