Package: microbiomeMQC 1.0.2
Jacob Dehinsilu
microbiomeMQC: Calculate 4 Key Reporting Measures
Perform calculations for the WHO International Reference Reagents for the microbiome. Using strain, species or genera abundance tables generated through analysis of 16S ribosomal RNA sequencing or shotgun sequencing which included a reference reagent. This package will calculate measures of sensitivity, False positive relative abundance, diversity, and similarity based on mean average abundances with respect to the reference reagent.
Authors:
microbiomeMQC_1.0.2.tar.gz
microbiomeMQC_1.0.2.tar.gz(r-4.5-noble)microbiomeMQC_1.0.2.tar.gz(r-4.4-noble)
microbiomeMQC_1.0.2.tgz(r-4.4-emscripten)microbiomeMQC_1.0.2.tgz(r-4.3-emscripten)
microbiomeMQC.pdf |microbiomeMQC.html✨
microbiomeMQC/json (API)
# Install 'microbiomeMQC' in R: |
install.packages('microbiomeMQC', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- MQC_testdata - MQC_testdata
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 3 months agofrom:6f10af5495. Checks:OK: 2. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 16 2024 |
R-4.5-linux | OK | Nov 16 2024 |
Exports:microbiomeMQC
Dependencies:cellrangercliclustercpp11crayonfansigluehmslatticelifecyclemagrittrMASSMatrixmgcvnlmepermutepillarpkgconfigprettyunitsprogressR6readxlrematchrlangtibbleutf8vctrsvegan
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Calculate 4 key reporting measures | microbiomeMQC |
MQC_testdata | MQC_testdata |