{
  "_id": "6a1f055fb401979e7341b96d",
  "Package": "microbiomeMQC",
  "Type": "Package",
  "Title": "Calculate 4 Key Reporting Measures",
  "Version": "1.0.2",
  "Maintainer": "Jacob Dehinsilu <jacobdehinsilu@outlook.com>",
  "Description": "Perform calculations for the WHO International Reference\nReagents for the microbiome. Using strain, species or genera\nabundance tables generated through analysis of 16S ribosomal\nRNA sequencing or shotgun sequencing which included a reference\nreagent. This package will calculate measures of sensitivity,\nFalse positive relative abundance, diversity, and similarity\nbased on mean average abundances with respect to the reference\nreagent.",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.2.3",
  "VignetteBuilder": "knitr",
  "Authors@R": "c(person(given = \"Jacob\",\nfamily = \"Dehinsilu\",\nrole = c(\"aut\", \"cre\"),\nemail = \"jacobdehinsilu@outlook.com\",\ncomment = c(ORCID = \"0000-0001-9041-970X\")),\nperson(given = \"Ravneet\",\nfamily = \"Bhuller\",\nrole = \"aut\"))",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-18 07:25:54 UTC",
    "User": "root"
  },
  "Author": "Jacob Dehinsilu [aut, cre]\n(<https://orcid.org/0000-0001-9041-970X>), Ravneet Bhuller\n[aut]",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2024-09-17 02:33:49 UTC",
  "RemoteUrl": "https://github.com/cran/microbiomeMQC",
  "RemoteRef": "HEAD",
  "RemoteSha": "6f10af549573b58aec4e2147fee22106ba714cab",
  "MD5sum": "b4ce2a2daa1724befff933a4af875e15",
  "_user": "cran",
  "_type": "src",
  "_file": "microbiomeMQC_1.0.2.tar.gz",
  "_fileid": "aac396be1d2a6c90e31a0b885fd0bb021f94e3f9bed287c41f1099ab5bd0d201",
  "_filesize": 84253,
  "_sha256": "aac396be1d2a6c90e31a0b885fd0bb021f94e3f9bed287c41f1099ab5bd0d201",
  "_created": "2026-05-18T07:25:54.000Z",
  "_published": "2026-06-02T16:31:27.542Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79121041178,
      "time": 148,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7051823488"
    },
    {
      "job": 79121041261,
      "time": 129,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7051817938"
    },
    {
      "job": 79121040504,
      "time": 173,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7051776664"
    },
    {
      "job": 79121040225,
      "time": 120,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7363816389"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/26019402887",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/microbiomeMQC",
  "_commit": {
    "id": "6f10af549573b58aec4e2147fee22106ba714cab",
    "author": "Jacob Dehinsilu <jacobdehinsilu@outlook.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.0.2\n",
    "time": 1726540429
  },
  "_maintainer": {
    "name": "Jacob Dehinsilu",
    "email": "jacobdehinsilu@outlook.com",
    "orcid": "0000-0001-9041-970X"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "readxl",
      "role": "Imports"
    },
    {
      "package": "vegan",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 172,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/microbiomeMQC"
  },
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/microbiomeMQC.html",
    "manual.pdf"
  ],
  "_realowner": "cran",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0.2",
      "date": "2024-09-16"
    }
  ],
  "_exports": [
    "microbiomeMQC"
  ],
  "_datasets": [
    {
      "name": "MQC_testdata",
      "title": "MQC_testdata",
      "object": "MQC_testdata",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Species",
        "DNA_hilo_RR",
        "PERFECT",
        "HIGH.FPRA",
        "HIGH.DIVERSITY",
        "LOW.SENSITIVITY"
      ],
      "rows": 26,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "microbiomeMQC",
      "title": "Calculate 4 key reporting measures",
      "topics": [
        "microbiomeMQC"
      ]
    },
    {
      "page": "MQC_testdata",
      "title": "MQC_testdata",
      "topics": [
        "MQC_testdata"
      ]
    }
  ],
  "_rundeps": [
    "cellranger",
    "cli",
    "cluster",
    "cpp11",
    "crayon",
    "glue",
    "hms",
    "lattice",
    "lifecycle",
    "magrittr",
    "MASS",
    "Matrix",
    "mgcv",
    "nlme",
    "permute",
    "pillar",
    "pkgconfig",
    "prettyunits",
    "progress",
    "R6",
    "readxl",
    "rematch",
    "rlang",
    "tibble",
    "utf8",
    "vctrs",
    "vegan"
  ],
  "_vignettes": [
    {
      "source": "using_microbiomeMQC.Rmd",
      "filename": "using_microbiomeMQC.html",
      "title": "Using microbiomeMQC",
      "engine": "knitr::rmarkdown",
      "headings": [],
      "created": "2024-09-17 02:33:49",
      "modified": "2024-09-17 02:33:49",
      "commits": 1
    }
  ],
  "_score": 2,
  "_indexed": true,
  "_nocasepkg": "microbiomemqc",
  "_universes": [
    "cran"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.2",
      "date": "2026-05-18T07:28:07.000Z",
      "distro": "noble",
      "commit": "6f10af549573b58aec4e2147fee22106ba714cab",
      "fileid": "cb062c618ebc53d1405a3fa78c5f17eb2778707aa9b47cc4e08f5c1a3694b441",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26019402887"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.2",
      "date": "2026-05-18T07:27:58.000Z",
      "distro": "noble",
      "commit": "6f10af549573b58aec4e2147fee22106ba714cab",
      "fileid": "71e40afa67a1205d457de5124e581d63aebecd6dd8c81c431290f0bf0ca5ef71",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26019402887"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.2",
      "date": "2026-06-02T16:31:00.000Z",
      "commit": "6f10af549573b58aec4e2147fee22106ba714cab",
      "fileid": "e2b26126e78ad7f1e6db6d75b83e2e4a65292b8c64ea844b10a2c678ad1e619f",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26019402887"
    }
  ]
}