Package: mappeR 1.1.0
George Clare Kennedy
mappeR: Construct and Visualize TDA Mapper Graphs
Topological data analysis (TDA) is a method of data analysis that uses techniques from topology to analyze high-dimensional data. Here we implement Mapper, an algorithm from this area developed by Singh, Mémoli and Carlsson (2007) which generalizes the concept of a Reeb graph <https://en.wikipedia.org/wiki/Reeb_graph>. The output graph is able to be visualized in R using 'igraph' or using a free network analysis software called 'Cytoscape', available for download from at <https://cytoscape.org/>.
Authors:
mappeR_1.1.0.tar.gz
mappeR_1.1.0.tar.gz(r-4.5-noble)mappeR_1.1.0.tar.gz(r-4.4-noble)
mappeR_1.1.0.tgz(r-4.4-emscripten)mappeR_1.1.0.tgz(r-4.3-emscripten)
mappeR.pdf |mappeR.html✨
mappeR/json (API)
NEWS
| # Install 'mappeR' in R: |
| install.packages('mappeR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/uiowa-applied-topology/mapper/issues
Last updated 7 days agofrom:544d2fbad4. Checks:OK: 2. Indexed: no.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 17 2024 |
| R-4.5-linux | OK | Oct 17 2024 |
Exports:create_1D_mapper_objectcreate_ball_mapper_objectcreate_ballscreate_clusterball_mapper_objectcreate_mapper_objectcreate_width_balanced_covereccentricity_filtermapper_object_to_igraph
Dependencies:clicpp11fastclusterglueigraphlatticelifecyclemagrittrMatrixpkgconfigrlangvctrs
