Package: lakhesis 1.1.2

Stephen A. Collins-Elliott

lakhesis: Consensus Seriation for Binary Data

Determining consensus seriations for binary incidence matrices, using a two-step process of Procrustes-fit correspondence analysis for heuristic selection of partial seriations and iterative regression to establish a single consensus. Contains the Lakhesis Calculator, a graphical platform for identifying seriated sequences. Collins-Elliott (2026) "Lakhesis: Consensus Seriation via Iterative Regression of Partial Rankings for Binary Data" <doi:10.1080/02664763.2026.2672564>.

Authors:Stephen A. Collins-Elliott [aut, cre]

lakhesis_1.1.2.tar.gz
lakhesis_1.1.2.tar.gz(r-4.7-arm64)lakhesis_1.1.2.tar.gz(r-4.7-x86_64)lakhesis_1.1.2.tar.gz(r-4.6-arm64)lakhesis_1.1.2.tar.gz(r-4.6-x86_64)
lakhesis_1.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
lakhesis/json (API)

# Install 'lakhesis' in R:
install.packages('lakhesis', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

openblascpp

3.00 score 3 scripts 606 downloads 18 exports 61 dependencies

Last updated from:6a3efef4c5. Checks:4 NOTE, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-arm64NOTE166
linux-devel-x86_64NOTE146
source / vignettesOK216
linux-release-arm64NOTE130
linux-release-x86_64NOTE149
wasm-releaseOK132

Exports:ca_procrustesca_procrustes_serconc_cconc_wrccor_sqelement_evalim_longim_mergeim_read_csvim_reflakhesizeLCspearman_sqstrand_addstrand_createstrand_extractstrand_suppressstrands_create

Dependencies:base64encbitbit64bslibcacachemclicliprcommonmarkcpp11crayondigestfarverfastmapfontawesomefsggplot2gluegtablehmshtmltoolshttpuvisobandjquerylibjsonlitelabelinglaterlifecyclemagrittrmemoisemimeotelpillarpkgconfigprettyunitsprogresspromisesR6rappdirsrbibutilsRColorBrewerRcppRcppArmadilloRdpackreadrrlangS7sassscalesshinyshinydashboardsourcetoolstibbletidyselecttzdbutf8vctrsviridisLitevroomwithrxtable

A Guide to Lakhesis

Rendered fromguide-to-lakhesis.Rmdusingknitr::rmarkdownon May 29 2026.

Last update: 2026-04-25
Started: 2026-04-25

Readme and manuals

Help Manual

Help pageTopics
Correspondence Analysis with Procrustes Fittingca_procrustes ca_procrustes.incidence_matrix ca_procrustes.matrix
Seriate Procrustes-Fit CA Scoresca_procrustes_ser ca_procrustes_ser.incidence_matrix ca_procrustes_ser.matrix
Optimality Criterion: Kendall-Doran (Column) Concentrationconc_c conc_c.incidence_matrix conc_c.matrix
Optimality Criterion: Weighted Row-Column Concentrationconc_wrc conc_wrc.incidence_matrix conc_wrc.matrix
Optimality Criterion: Squared Correlationcor_sq cor_sq.incidence_matrix cor_sq.matrix
Evaluating Element Fitelement_eval element_eval.incidence_matrix element_eval.matrix
Convert Incidence Matrix to Pairs (Long Format)im_long im_long.incidence_matrix im_long.matrix
Merge Two Incidence Matricesim_merge im_merge.incidence_matrix im_merge.matrix
Read csv File to Incidence Matrixim_read_csv
Create Reference Matrixim_ref im_ref.matrix
Lakhesizelakhesize lakhesize.default lakhesize.strands
Lakhesis CalculatorLC
Quattro Fontanili - Strandsqf_strands
Quattro Fontaniliquattrofontanili
Spearman Correlation Squaredspearman_sq spearman_sq.numeric
Add Strand to List of Strandsstrand_add strand_add.strand
Create Strand Object from Seriated Incidence Matrixstrand_create strand_create.incidence_matrix strand_create.matrix
Strand Extractstrand_extract
Suppress Element from Strandsstrand_suppress strand_suppress.default strand_suppress.strands
Create List of Strandsstrands_create strands_create.list