Package: gRaphiaExtra 0.26.9

Nilabhra R Das

gRaphiaExtra: An R Package for Integrating 'Seurat' Objects into 'gRaphia'

Utilising graph-based network analysis frameworks, 'Graphia' <https://graphia.app/> is a powerful open source visual analytics application developed to aid the interpretation of large and complex datasets. For more details, see article by Freeman et al. (2022) <doi:10.1371/journal.pcbi.1010310>. 'gRaphia' is an extension of the 'Graphia' application within the R environment, providing tools for network analysis and visualisation. 'gRaphiaExtra' provides additional functionality specifically designed for single-cell RNA-sequencing data, enabling users to seamlessly integrate and utilise existing 'Seurat' analysis outputs in 'gRaphia'. The package also provides supplementary functions to support and enhance the 'gRaphia' analysis framework.

Authors:Nilabhra R Das [cre, aut], Kaitlyn A Flynn [aut], John P Kemp [aut]

gRaphiaExtra_0.26.9.tar.gz
gRaphiaExtra_0.26.9.zip(r-4.7-any)gRaphiaExtra_0.26.9.zip(r-4.6-any)
gRaphiaExtra_0.26.9.tar.gz(r-4.7-any)gRaphiaExtra_0.26.9.tar.gz(r-4.6-any)
gRaphiaExtra_0.26.9.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
gRaphiaExtra/json (API)

# Install 'gRaphiaExtra' in R:
install.packages('gRaphiaExtra', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 1 exports 17 dependencies

Last updated from:f8f6261488. Checks:6 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK119
source / vignettesOK146
linux-releaseOK119
windows-develOK60
windows-releaseOK77
wasm-releaseOK122

Exports:testSeuratClusterEnrichment

Dependencies:backportscheckmateclidplyrgenericsgluelifecyclemagrittrpillarpkgconfigR6rlangtibbletidyselectutf8vctrswithr