Package: gRaphiaExtra 0.26.9

Nilabhra R Das
gRaphiaExtra: An R Package for Integrating 'Seurat' Objects into 'gRaphia'
Utilising graph-based network analysis frameworks, 'Graphia' <https://graphia.app/> is a powerful open source visual analytics application developed to aid the interpretation of large and complex datasets. For more details, see article by Freeman et al. (2022) <doi:10.1371/journal.pcbi.1010310>. 'gRaphia' is an extension of the 'Graphia' application within the R environment, providing tools for network analysis and visualisation. 'gRaphiaExtra' provides additional functionality specifically designed for single-cell RNA-sequencing data, enabling users to seamlessly integrate and utilise existing 'Seurat' analysis outputs in 'gRaphia'. The package also provides supplementary functions to support and enhance the 'gRaphia' analysis framework.
Authors:
gRaphiaExtra_0.26.9.tar.gz
gRaphiaExtra_0.26.9.zip(r-4.7-any)gRaphiaExtra_0.26.9.zip(r-4.6-any)
gRaphiaExtra_0.26.9.tar.gz(r-4.7-any)gRaphiaExtra_0.26.9.tar.gz(r-4.6-any)
gRaphiaExtra_0.26.9.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
gRaphiaExtra/json (API)
| # Install 'gRaphiaExtra' in R: |
| install.packages('gRaphiaExtra', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:f8f6261488. Checks:6 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 119 | ||
| source / vignettes | OK | 146 | ||
| linux-release | OK | 119 | ||
| windows-devel | OK | 60 | ||
| windows-release | OK | 77 | ||
| wasm-release | OK | 122 |
Exports:testSeuratClusterEnrichment
Dependencies:backportscheckmateclidplyrgenericsgluelifecyclemagrittrpillarpkgconfigR6rlangtibbletidyselectutf8vctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| testSeuratClusterEnrichment - Test Seurat Clusters for Enrichment | testSeuratClusterEnrichment |