{ "_id": "6aad6c703d719c1f840771a4", "Package": "gRaphiaExtra", "Type": "Package", "Title": "An R Package for Integrating 'Seurat' Objects into 'gRaphia'", "Version": "0.26.9", "Authors@R": "c(\nperson(\"Nilabhra R\", \"Das\", , \"n.das@uq.edu.au\", role = c(\"cre\", \"aut\"), comment = c(ORCID = \"0000-0001-8187-0080\")),\nperson(\"Kaitlyn A\", \"Flynn\", , \"k.flynn@uq.edu.au\", role = \"aut\", comment = c(ORCID = \"0000-0002-8951-7887\")),\nperson(\"John P\", \"Kemp\", , \"j.kemp2@uq.edu.au\", role = \"aut\", comment = c(ORCID = \"0000-0002-9105-2249\"))\n)", "Maintainer": "Nilabhra R Das ", "Description": "Utilising graph-based network analysis frameworks,\n'Graphia' is a powerful open source\nvisual analytics application developed to aid the\ninterpretation of large and complex datasets. For more details,\nsee article by Freeman et al. (2022)\n. 'gRaphia' is an extension\nof the 'Graphia' application within the R environment,\nproviding tools for network analysis and visualisation.\n'gRaphiaExtra' provides additional functionality specifically\ndesigned for single-cell RNA-sequencing data, enabling users to\nseamlessly integrate and utilise existing 'Seurat' analysis\noutputs in 'gRaphia'. The package also provides supplementary\nfunctions to support and enhance the 'gRaphia' analysis\nframework.", "License": "GPL-3", "Encoding": "UTF-8", "RoxygenNote": "7.3.3", "NeedsCompilation": "no", "Packaged": { "Date": "2026-09-18 16:50:22 UTC", "User": "root" }, "Author": "Nilabhra R Das [cre, aut] (ORCID:\n), Kaitlyn A Flynn [aut]\n(ORCID: ), John P Kemp\n[aut] (ORCID: )", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2026-09-18 16:34:21 UTC", "RemoteUrl": "https://github.com/cran/gRaphiaExtra", "RemoteRef": "HEAD", "RemoteSha": "f8f6261488b91d12d0683222f5001c06dc8b44d3", "_user": "cran", "_type": "src", "_file": "gRaphiaExtra_0.26.9.tar.gz", "_fileid": "https://r2.ropensci.org/be12d611a1ae69943b4bab74f2b182e7466da3ac60ee766cdbf053ecdb3e9b25", "_filesize": 88706, "_sha256": "be12d611a1ae69943b4bab74f2b182e7466da3ac60ee766cdbf053ecdb3e9b25", "_expires": "2026-12-27T16:53:02.000Z", "_created": "2026-09-18T16:50:22.000Z", "_published": "2026-09-18T16:53:04.143Z", "_jobs": [ { "job": 105684205012, "time": 119, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "10558542519" }, { "job": 105684204941, "time": 119, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "10557862355" }, { "job": 105683412954, "time": 146, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "10558121880" }, { "job": 105684204889, "time": 122, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "10557987344" }, { "job": 105684205778, "time": 60, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "10558287789" }, { "job": 105684205070, "time": 77, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "10558277759" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/cran/actions/runs/35370568857", "_status": "success", "_upstream": "https://github.com/cran/gRaphiaExtra", "_commit": { "id": "f8f6261488b91d12d0683222f5001c06dc8b44d3", "author": "Nilabhra R Das ", "committer": "cran-robot ", "message": "version 0.26.9\n", "time": 1789749261 }, "_maintainer": { "name": "Nilabhra R Das", "email": "n.das@uq.edu.au", "orcid": "0000-0001-8187-0080" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.4.2.0", "role": "Depends" }, { "package": "checkmate", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2026-38", "n": 1 } ], "_tags": [ { "name": "0.26.9", "date": "2026-09-18" } ], "_stars": 0, "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "followers": 630, "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/gRaphiaExtra" }, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/gRaphiaExtra.html", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt" ], "_cranurl": false, "_releases": [ { "version": "0.26.9", "date": "2026-09-18" } ], "_exports": [ "testSeuratClusterEnrichment" ], "_help": [ { "page": "testSeuratClusterEnrichment", "title": "testSeuratClusterEnrichment - Test Seurat Clusters for Enrichment", "topics": [ "testSeuratClusterEnrichment" ] } ], "_rundeps": [ "backports", "checkmate", "cli", "dplyr", "generics", "glue", "lifecycle", "magrittr", "pillar", "pkgconfig", "R6", "rlang", "tibble", "tidyselect", "utf8", "vctrs", "withr" ], "_score": 1, "_indexed": true, "_nocasepkg": "graphiaextra", "_universes": [ "cran" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.26.9", "date": "2026-09-18T16:52:24.000Z", "distro": "resolute", "commit": "f8f6261488b91d12d0683222f5001c06dc8b44d3", "fileid": "https://r2.ropensci.org/c6f25b461afce7f797ea1f6ce59bc1e2602d99985edfc725c6a7e88829a00c0a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/35370568857" }, { "r": "4.6.1", "os": "linux", "version": "0.26.9", "date": "2026-09-18T16:52:23.000Z", "distro": "resolute", "commit": "f8f6261488b91d12d0683222f5001c06dc8b44d3", "fileid": "https://r2.ropensci.org/e3c03cb0feb495fd5c909e8737a0f41423f45c97f3cef0c11b617476738d5235", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/35370568857" }, { "r": "4.6.0", "os": "wasm", "version": "0.26.9", "date": "2026-09-18T16:52:37.000Z", "commit": "f8f6261488b91d12d0683222f5001c06dc8b44d3", "fileid": "https://r2.ropensci.org/04e8e24dcee4f35bb872afa8f9bcb5a68647a65394eaa9c13caf4774683d10fe", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/35370568857" }, { "r": "4.7.0", "os": "win", "version": "0.26.9", "date": "2026-09-18T16:51:20.000Z", "commit": "f8f6261488b91d12d0683222f5001c06dc8b44d3", "fileid": "https://r2.ropensci.org/b960b35189147a7acc3329cf41aa0cc5c3659acfcb85da1f67c931ee82ad266a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/35370568857" }, { "r": "4.6.1", "os": "win", "version": "0.26.9", "date": "2026-09-18T16:51:38.000Z", "commit": "f8f6261488b91d12d0683222f5001c06dc8b44d3", "fileid": "https://r2.ropensci.org/6b2597cb00905f17499464df2aa18392d7c215b4b08b19c1ef0d79e7eb0a7cad", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/35370568857" } ] }