Package: agRee 0.5-3
Dai Feng
agRee: Various Methods for Measuring Agreement
Bland-Altman plot and scatter plot with identity line for visualization and point and interval estimates for different metrics related to reproducibility/repeatability/agreement including the concordance correlation coefficient, intraclass correlation coefficient, within-subject coefficient of variation, smallest detectable difference, and mean normalized smallest detectable difference.
Authors:
agRee_0.5-3.tar.gz
agRee_0.5-3.tar.gz(r-4.5-noble)agRee_0.5-3.tar.gz(r-4.4-noble)
agRee_0.5-3.tgz(r-4.4-emscripten)agRee_0.5-3.tgz(r-4.3-emscripten)
agRee.pdf |agRee.html✨
agRee/json (API)
| # Install 'agRee' in R: |
| install.packages('agRee', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- amygdala - PET Total Volume of Distribution
- brainStem - PET Total Volume of Distribution
- cerebellum - PET Total Volume of Distribution
- judgeRatings - Ratings of Different Judges
- lesionBurden - Total Lesion Burden
- lesionBurden.G - Total Lesion Burden
- lesionBurden.M - Total Lesion Burden
- petVT - PET Total Volume of Distribution
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 5 years agofrom:c2be14f241. Checks:OK: 2. Indexed: no.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Dec 06 2024 |
| R-4.5-linux | OK | Dec 06 2024 |
Exports:agree.cccagree.icc1agree.plotagree.sddagree.sddmagree.wscv
Dependencies:abindbootclicodagluelatticelifecyclelme4magrittrMASSMatrixMatrixModelsmcmcMCMCpackminqamiscFmvtnormnlmenloptrquantregR2jagsR2WinBUGSRcppRcppEigenrjagsrlangSparseMstringistringrsurvivalvctrs
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Concordance Correlation Coefficient | agree.ccc ccc.lognormalNormal.mcmc ccc.mm ccc.mvn.mcmc ccc.mvt.mcmc ccc.nonpara.bootstrap ccc.nonpara.jackknife |
| Intraclass correlation coefficient for one-way random anova model | agree.icc1 icc1.sf |
| Visualize the Agreement of Ratings among Different Raters | agree.plot |
| Smallest Detectable Difference | agree.sdd |
| Mean Normalized Smallest Detectable Difference | agree.sddm |
| Within-subject Coefficient of Variation | agree.wscv wscv.delta wscv.vst |
| Ratings of Different Judges | judgeRatings |
| Total Lesion Burden | lesionBurden lesionBurden.G lesionBurden.M |
| PET Total Volume of Distribution | amygdala brainStem cerebellum petVT |
