Package: Umatrix 4.0.1

Jorn Lotsch

Umatrix: Visualization of Structures in High-Dimensional Data

By gaining the property of emergence through self-organization, the enhancement of SOMs(self organizing maps) is called Emergent SOM (ESOM). The result of the projection by ESOM is a grid of neurons which can be visualised as a three dimensional landscape in form of the Umatrix. Further details can be found in the referenced publications (see url). This package offers tools for calculating and visualising the ESOM as well as Umatrix, Pmatrix and UStarMatrix. All the functionality is also available through graphical user interfaces implemented in 'shiny'. Based on the recognized data structures, the method can be used to generate new data.

Authors:Florian Lerch [aut], Michael Thrun [aut], Felix Pape [ctb], Jorn Lotsch [aut, cre], Raphael Paebst [ctb], Alfred Ultsch [aut]

Umatrix_4.0.1.tar.gz
Umatrix_4.0.1.tar.gz(r-4.5-noble)Umatrix_4.0.1.tar.gz(r-4.4-noble)
Umatrix_4.0.1.tgz(r-4.4-emscripten)Umatrix_4.0.1.tgz(r-4.3-emscripten)
Umatrix.pdf |Umatrix.html
Umatrix/json (API)

# Install 'Umatrix' in R:
install.packages('Umatrix', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.30 score 1 stars 11 scripts 244 downloads 6 mentions 12 exports 97 dependencies

Last updated 3 months agofrom:e35c5d194c. Checks:OK: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 01 2024
R-4.5-linux-x86_64OKNov 01 2024

Exports:calculate_Delauny_radiusesomTraingenerate_dataiClassificationiEsomTrainiUmapIslandiUstarmatrixplotMatrixpmatrixForEsomshowMatrix3DumatrixForEsomustarmatrixCalc

Dependencies:abindAdaptGaussaskpassbase64encbslibcachemclicolorspacecommonmarkcpp11crayoncrosstalkcurldata.tableDataVisualizationsdeldirdigestdotCall64dplyrevaluatefansifarverfastmapfieldsfontawesomefsgenericsgeometryggplot2gluegtablehighrhtmltoolshtmlwidgetshttpuvhttrisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclelinproglpSolvemagicmagrittrmapsMASSMatrixmemoisemgcvmimemunsellnlmeopensslpdistpillarpkgconfigplotlyplyrpngpracmapromisespurrrR6rappdirsRColorBrewerRcppRcppArmadilloRcppProgressreshape2rlangrmarkdownsassscalesshinyshinyjssourcetoolsspspamstringistringrsystibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunxtableyaml