Package: TreatmentPatterns 3.0.1

Maarten van Kessel

TreatmentPatterns: Analyzes Real-World Treatment Patterns of a Study Population of Interest

Computes treatment patterns within a given cohort using the Observational Medical Outcomes Partnership (OMOP) common data model (CDM). As described in Markus, Verhamme, Kors, and Rijnbeek (2022) <doi:10.1016/j.cmpb.2022.107081>.

Authors:Aniek Markus [aut], Maarten van Kessel [cre]

TreatmentPatterns_3.0.1.tar.gz
TreatmentPatterns_3.0.1.tar.gz(r-4.5-noble)TreatmentPatterns_3.0.1.tar.gz(r-4.4-noble)
TreatmentPatterns_3.0.1.tgz(r-4.4-emscripten)TreatmentPatterns_3.0.1.tgz(r-4.3-emscripten)
TreatmentPatterns.pdf |TreatmentPatterns.html
TreatmentPatterns/json (API)
NEWS

# Install 'TreatmentPatterns' in R:
install.packages('TreatmentPatterns', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/darwin-eu/treatmentpatterns/issues

Pkgdown site:https://darwin-eu-dev.github.io

On CRAN:

Conda:

3.54 score 586 downloads 9 exports 74 dependencies

Last updated 2 days agofrom:baa44172fc. Checks:3 OK. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKMar 10 2025
R-4.5-linuxOKMar 10 2025
R-4.4-linuxOKMar 10 2025

Exports:computePathwayscreateSankeyDiagramcreateSunburstPlotexecuteTreatmentPatternsexportgetResultsDataModelSpecificationsggSunburstplotEventDurationTreatmentPatternsResults

Dependencies:Andromedabackportsbase64encbitbit64blobbslibcachemcheckmateclicolorspacecpp11d3rDBIdbplyrdigestdplyrevaluatefansifarverfastmapfontawesomefsgenericsggplot2gluegtablehighrhmshtmltoolshtmlwidgetsigraphisobandjquerylibjsonliteknitrlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnetworkD3nlmepillarpkgconfigplogrpurrrR6rappdirsRColorBrewerrlangrmarkdownRSQLitesassscalesstringistringrsunburstRtibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunyamlzip

Defining Cohorts

Rendered fromDefiningCohorts.Rmdusingknitr::rmarkdownon Mar 10 2025.

Last update: 2024-01-27
Started: 2023-12-12

Readme and manuals

Help Manual

Help pageTopics
computePathwayscomputePathways
createSankeyDiagramcreateSankeyDiagram
createSunburstPlotcreateSunburstPlot
executeTreatmentPatternsexecuteTreatmentPatterns
exportexport
getResultsDataModelSpecificationsgetResultsDataModelSpecifications
ggSunburstggSunburst
plotEventDurationplotEventDuration
TreatmentPatternsResults ClassTreatmentPatternsResults