Package: SillyPutty 0.4.1

Kevin R. Coombes

SillyPutty: Silly Putty Clustering

Implements a simple, novel clustering algorithm based on optimizing the silhouette width. See <doi:10.1101/2023.11.07.566055> for details.

Authors:Kevin R. Coombes, Dwayne Tally

SillyPutty_0.4.1.tar.gz
SillyPutty_0.4.1.tar.gz(r-4.5-noble)SillyPutty_0.4.1.tar.gz(r-4.4-noble)
SillyPutty_0.4.1.tgz(r-4.4-emscripten)SillyPutty_0.4.1.tgz(r-4.3-emscripten)
SillyPutty.pdf |SillyPutty.html✨
SillyPutty/json (API)
NEWS

# Install 'SillyPutty' in R:

install.packages('SillyPutty', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://r-forge.r-project.org/projects/oompa

Datasets:

eucdist - An example Euclidean distance matrix
trueGroups - An example Euclidean distance matrix

On CRAN:

clustering

2.00 score 178 downloads 6 exports 28 dependencies

Last updated 1 years agofrom:1ed800341d. Checks:3 OK. Indexed: yes.

Target	Result	Latest binary
Doc / Vignettes	OK	Mar 05 2025
R-4.5-linux	OK	Mar 05 2025
R-4.4-linux	OK	Mar 05 2025

Exports:findClusterNumber HCSP plot RandomSillyPutty SillyPutty summary

Dependencies:ade4 Biobase BiocGenerics changepoint ClassDiscovery clue cluster colorspace cpm generics kernlab lattice MASS mclust movMF oompaBase oompaData PCDimension pixmap Polychrome Rcpp RcppArmadillo scatterplot3d skmeans slam sp Thresher zoo

Introduction to SillyPutty

Rendered fromSillyPuttyVignette.Rmdusingknitr::rmarkdownon Mar 05 2025.

Last update: 2023-11-08
Started: 2023-11-08

Citation

To cite package ‘SillyPutty’ in publications use:

Coombes KR, Tally D (2024). SillyPutty: Silly Putty Clustering. R package version 0.4.1, https://CRAN.R-project.org/package=SillyPutty.

ATTENTION: This citation information has been auto-generated from the package DESCRIPTION file and may need manual editing, see ‘help("citation")’.

Corresponding BibTeX entry:

  @Manual{,
    title = {SillyPutty: Silly Putty Clustering},
    author = {Kevin R. Coombes and Dwayne Tally},
    year = {2024},
    note = {R package version 0.4.1},
    url = {https://CRAN.R-project.org/package=SillyPutty},
  }

Readme and manuals

Help Manual

Help page	Topics
An example Euclidean distance matrix	eucdist trueGroups
Using SillyPutty to find the number of clusters	findClusterNumber
Combining Hierarchical Clustering with SillyPutty	HCSP
Running SillyPutty From Multiple Random Initial Clusterings	plot,RandomSillyPutty,matrix-method plot,RandomSillyPutty,missing-method plot,RSPSummary,matrix-method plot,RSPSummary,missing-method RandomSillyPutty RandomSillyPutty-class summary,RandomSillyPutty-method
Running SillyPutty	SillyPutty SillyPutty-class