Package: SillyPutty 0.4.1

Kevin R. Coombes

SillyPutty: Silly Putty Clustering

Implements a simple, novel clustering algorithm based on optimizing the silhouette width. See <doi:10.1101/2023.11.07.566055> for details.

Authors:Kevin R. Coombes, Dwayne Tally

SillyPutty_0.4.1.tar.gz
SillyPutty_0.4.1.tar.gz(r-4.5-noble)SillyPutty_0.4.1.tar.gz(r-4.4-noble)
SillyPutty_0.4.1.tgz(r-4.4-emscripten)SillyPutty_0.4.1.tgz(r-4.3-emscripten)
SillyPutty.pdf |SillyPutty.html✨
SillyPutty/json (API)
NEWS

# Install 'SillyPutty' in R:
install.packages('SillyPutty', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://r-forge.r-project.org/projects/oompa

Datasets:
  • eucdist - An example Euclidean distance matrix
  • trueGroups - An example Euclidean distance matrix

clustering

2.00 score 3 scripts 148 downloads 6 exports 28 dependencies

Last updated 10 months agofrom:1ed800341d. Checks:OK: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKDec 05 2024
R-4.5-linuxOKDec 05 2024

Exports:findClusterNumberHCSPplotRandomSillyPuttySillyPuttysummary

Dependencies:ade4BiobaseBiocGenericschangepointClassDiscoveryclueclustercolorspacecpmgenericskernlablatticeMASSmclustmovMFoompaBaseoompaDataPCDimensionpixmapPolychromeRcppRcppArmadilloscatterplot3dskmeansslamspThresherzoo

Introduction to SillyPutty

Rendered fromSillyPuttyVignette.Rmdusingknitr::rmarkdownon Dec 05 2024.

Last update: 2023-11-08
Started: 2023-11-08

Readme and manuals

Help Manual

Help pageTopics
An example Euclidean distance matrixeucdist trueGroups
Using SillyPutty to find the number of clustersfindClusterNumber
Combining Hierarchical Clustering with SillyPuttyHCSP
Running SillyPutty From Multiple Random Initial Clusteringsplot,RandomSillyPutty,matrix-method plot,RandomSillyPutty,missing-method plot,RSPSummary,matrix-method plot,RSPSummary,missing-method RandomSillyPutty RandomSillyPutty-class summary,RandomSillyPutty-method
Running SillyPuttySillyPutty SillyPutty-class