Package: SillyPutty 0.4.1

Kevin R. Coombes

SillyPutty: Silly Putty Clustering

Implements a simple, novel clustering algorithm based on optimizing the silhouette width. See <doi:10.1101/2023.11.07.566055> for details.

Authors:Kevin R. Coombes, Dwayne Tally

SillyPutty_0.4.1.tar.gz
SillyPutty_0.4.1.tar.gz(r-4.5-noble)SillyPutty_0.4.1.tar.gz(r-4.4-noble)
SillyPutty_0.4.1.tgz(r-4.4-emscripten)SillyPutty_0.4.1.tgz(r-4.3-emscripten)
SillyPutty.pdf |SillyPutty.html
SillyPutty/json (API)
NEWS

# Install SillyPutty in R:
install.packages('SillyPutty', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://r-forge.r-project.org/projects/oompa

Datasets:
  • eucdist - An example Euclidean distance matrix
  • trueGroups - An example Euclidean distance matrix

6 exports 0.09 score 27 dependencies 165 downloads

Last updated 4 months agofrom:1ed800341da1ed6e9509e423edc614de5bf2948b

Exports:findClusterNumberHCSPplotRandomSillyPuttySillyPuttysummary

Dependencies:ade4BiobaseBiocGenericschangepointClassDiscoveryclueclustercolorspacecpmkernlablatticeMASSmclustmovMFoompaBaseoompaDataPCDimensionpixmapPolychromeRcppRcppArmadilloscatterplot3dskmeansslamspThresherzoo

Introduction to SillyPutty

Rendered fromSillyPuttyVignette.Rmdusingknitr::rmarkdownon Jun 08 2024.

Last update: 2023-11-08
Started: 2023-11-08

Readme and manuals

Help Manual

Help pageTopics
An example Euclidean distance matrixeucdist trueGroups
Using SillyPutty to find the number of clustersfindClusterNumber
Combining Hierarchical Clustering with SillyPuttyHCSP
Running SillyPutty From Multiple Random Initial Clusteringsplot,RandomSillyPutty,matrix-method plot,RandomSillyPutty,missing-method plot,RSPSummary,matrix-method plot,RSPSummary,missing-method RandomSillyPutty RandomSillyPutty-class summary,RandomSillyPutty-method
Running SillyPuttySillyPutty SillyPutty-class