Package: RCytoGPS 1.2.7
Kevin R. Coombes
RCytoGPS: Using Cytogenetics Data in R
Defines classes and methods to process text-based cytogenetics using the CytoGPS web site, then import the results into R for further analysis and graphing.
Authors:
RCytoGPS_1.2.7.tar.gz
RCytoGPS_1.2.7.tar.gz(r-4.5-noble)RCytoGPS_1.2.7.tar.gz(r-4.4-noble)
RCytoGPS_1.2.7.tgz(r-4.4-emscripten)RCytoGPS_1.2.7.tgz(r-4.3-emscripten)
RCytoGPS.pdf |RCytoGPS.html✨
RCytoGPS/json (API)
NEWS
# Install 'RCytoGPS' in R: |
install.packages('RCytoGPS', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://r-forge.r-project.org/projects/oompa
Datasets:
- cytoData - Example Cytoband Data
- cytobandLocations - Cytoband Locations
- idiocolors - Cytoband Locations
Last updated 3 months agofrom:8596692e96. Checks:OK: 2. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 04 2024 |
R-4.5-linux | OK | Dec 04 2024 |
Exports:barplotChromosomeCytobandDataimageprecleanreadLGFsummary
Dependencies:rjson
Readme and manuals
Help Manual
Help page | Topics |
---|---|
The 'Chromosome' Class | Chromosome Chromosome-class image,Chromosome-method |
Example Cytoband Data | cytoband-data cytoData |
The 'CytobandData' Class | CytobandData CytobandData-class summary,CytobandData-method |
Idiogram Graphs | barplot,CytobandData-method Idiogram Graphs image,CytobandData-method |
Cytoband Locations | cytobandLocations idiocolors |
Pre-clean Karyotypes | preclean |
Extracting LGF karyotype data from JSON files | readLGF |