Package: PRANA 1.0.6
Seungjun Ahn
PRANA: Pseudo-Value Regression Approach for Network Analysis (PRANA)
A novel pseudo-value regression approach for the differential co-expression network analysis in expression data, which can incorporate additional clinical variables in the model. This is a direct regression modeling for the differential network analysis, and it is therefore computationally amenable for the most users. The full methodological details can be found in Ahn S et al (2023) <doi:10.1186/s12859-022-05123-w>.
Authors:
PRANA_1.0.6.tar.gz
PRANA_1.0.6.tar.gz(r-4.5-noble)PRANA_1.0.6.tar.gz(r-4.4-noble)
PRANA_1.0.6.tgz(r-4.4-emscripten)PRANA_1.0.6.tgz(r-4.3-emscripten)
PRANA.pdf |PRANA.html✨
PRANA/json (API)
| # Install 'PRANA' in R: |
| install.packages('PRANA', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- combinedCOPDdat_RGO - Chronic Obstructive Pulmonary Disease (COPD) data
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 months agofrom:3ebe5d0257. Checks:OK: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 22 2024 |
| R-4.5-linux | OK | Nov 22 2024 |
Exports:adjpvaladjpval_specific_varcoeffcoeff_specific_varEBSPRANArun_aracnesigDCGnamessigDCGtabthetahats
Dependencies:cliDEoptimRdplyrfansigenericsglueinfotheolifecyclemagrittrminetpillarpkgconfigR6rlangrobustbasetibbletidyselectutf8vctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| adjpval | adjpval |
| adjpval_specific_var | adjpval_specific_var |
| coeff | coeff |
| coeff_specific_var | coeff_specific_var |
| Chronic Obstructive Pulmonary Disease (COPD) data | combinedCOPDdat_RGO |
| EBS | EBS |
| PRANA | PRANA |
| run_aracne | run_aracne |
| sigDCGnames | sigDCGnames |
| sigDCGtab | sigDCGtab |
| thetahats | thetahats |