Package: PCMBaseCpp 0.1.9
Venelin Mitov
PCMBaseCpp: Fast Likelihood Calculation for Phylogenetic Comparative Models
Provides a C++ backend for multivariate phylogenetic comparative models implemented in the R-package 'PCMBase'. Can be used in combination with 'PCMBase' to enable fast and parallel likelihood calculation. Implements the pruning likelihood calculation algorithm described in Mitov et al. (2018) <arxiv:1809.09014>. Uses the 'SPLITT' C++ library for parallel tree traversal described in Mitov and Stadler (2018) <doi:10.1111/2041-210X.13136>.
Authors:
PCMBaseCpp_0.1.9.tar.gz
PCMBaseCpp_0.1.9.tar.gz(r-4.5-noble)PCMBaseCpp_0.1.9.tar.gz(r-4.4-noble)
PCMBaseCpp_0.1.9.tgz(r-4.4-emscripten)PCMBaseCpp_0.1.9.tgz(r-4.3-emscripten)
PCMBaseCpp.pdf |PCMBaseCpp.html✨
PCMBaseCpp/json (API)
NEWS
| # Install 'PCMBaseCpp' in R: |
| install.packages('PCMBaseCpp', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/venelin/pcmbasecpp/issues
- benchmarkData - Data for performing a benchmark
- benchmarkResults - Results from running a performance benchmark on a personal computer including the time for parameter transformation
- benchmarkResultsNoTransform - Results from running a performance benchmark on a personal computer excluding the time for parameter transformation
Last updated 5 years agofrom:51842d78ec. Checks:OK: 1 NOTE: 1. Indexed: no.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 09 2024 |
| R-4.5-linux-x86_64 | NOTE | Nov 09 2024 |
Exports:BenchmarkRvsCppMiniBenchmarkRvsCppPCMBaseCppIsADevReleasePCMInfoCppPCMParamGetFullVectorPCMTreePreorderCpp
Dependencies:abindapeclicolorspacedata.tabledigestexpmfansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellmvtnormnlmePCMBasepillarpkgconfigR6RColorBrewerRcppRcppArmadillorlangscalestibbleutf8vctrsviridisLitewithrxtable
