Package: MedZIsc 0.0.5

Seungjun Ahn
MedZIsc: Statistical Framework for Co-Mediators of Zero-Inflated Single-Cell Data
A causal mediation framework for single-cell data that incorporates two key features ('MedZIsc', pronounced Magics): (1) zero-inflation using beta regression and (2) overdispersed expression counts using negative binomial regression. This approach also includes a screening step based on penalized and marginal models to handle high-dimensionality. Full methodological details are available in our recent preprint by Ahn S et al. (2025) <doi:10.48550/arXiv.2507.06113>.
Authors:
MedZIsc_0.0.5.tar.gz
MedZIsc_0.0.5.zip(r-4.7-any)MedZIsc_0.0.5.zip(r-4.6-any)
MedZIsc_0.0.5.tar.gz(r-4.7-any)MedZIsc_0.0.5.tar.gz(r-4.6-any)
MedZIsc_0.0.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
MedZIsc/json (API)
| # Install 'MedZIsc' in R: |
| install.packages('MedZIsc', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- simulated_data - Simulated Mediation Dataset
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:d9148cd0d2. Checks:6 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 199 | ||
| source / vignettes | OK | 206 | ||
| linux-release | OK | 181 | ||
| windows-devel | OK | 122 | ||
| windows-release | OK | 137 | ||
| wasm-release | OK | 114 |
Exports:adjust_Fgcompute_MMagics
Dependencies:betaregcodetoolsflexmixforeachFormulaglmnetiteratorslatticelmtestMASSMatrixmodeltoolsnnetRcppRcppEigensandwichshapesurvivalzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| adjust_Fg | adjust_Fg |
| Compute M Mediator | compute_M |
| Magics | Magics |
| Simulated Mediation Dataset | simulated_data |