Package: MedZIsc 0.0.4

Seungjun Ahn

MedZIsc: Statistical Framework for Co-Mediators of Zero-Inflated Single-Cell Data

A causal mediation framework for single-cell data that incorporates two key features ('MedZIsc', pronounced Magics): (1) zero-inflation using beta regression and (2) overdispersed expression counts using negative binomial regression. This approach also includes a screening step based on penalized and marginal models to handle high-dimensionality. Full methodological details are available in our recent preprint by Ahn S and Li Z (2025) <doi:10.48550/arXiv.2505.22986>.

Authors:Seungjun Ahn [cre, aut], Zhigang Li [ctb]

MedZIsc_0.0.4.tar.gz
MedZIsc_0.0.4.tar.gz(r-4.7-any)MedZIsc_0.0.4.tar.gz(r-4.6-any)
MedZIsc_0.0.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION
card.svg |card.png
MedZIsc/json (API)

# Install 'MedZIsc' in R:
install.packages('MedZIsc', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 187 downloads 2 exports 19 dependencies

Last updated from:b32e7f7f3f. Checks:4 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK189
source / vignettesOK204
linux-release-x86_64OK205
wasm-releaseOK125

Exports:adjust_FgMagics

Dependencies:betaregcodetoolsflexmixforeachFormulaglmnetiteratorslatticelmtestMASSMatrixmodeltoolsnnetRcppRcppEigensandwichshapesurvivalzoo