Package: MedZIsc 0.0.5

Seungjun Ahn

MedZIsc: Statistical Framework for Co-Mediators of Zero-Inflated Single-Cell Data

A causal mediation framework for single-cell data that incorporates two key features ('MedZIsc', pronounced Magics): (1) zero-inflation using beta regression and (2) overdispersed expression counts using negative binomial regression. This approach also includes a screening step based on penalized and marginal models to handle high-dimensionality. Full methodological details are available in our recent preprint by Ahn S et al. (2025) <doi:10.48550/arXiv.2507.06113>.

Authors:Seungjun Ahn [cre, aut], Zhigang Li [ctb]

MedZIsc_0.0.5.tar.gz
MedZIsc_0.0.5.zip(r-4.7-any)MedZIsc_0.0.5.zip(r-4.6-any)
MedZIsc_0.0.5.tar.gz(r-4.7-any)MedZIsc_0.0.5.tar.gz(r-4.6-any)
MedZIsc_0.0.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
MedZIsc/json (API)

# Install 'MedZIsc' in R:
install.packages('MedZIsc', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 1 stars 328 downloads 3 exports 19 dependencies

Last updated from:d9148cd0d2. Checks:6 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK199
source / vignettesOK206
linux-releaseOK181
windows-develOK122
windows-releaseOK137
wasm-releaseOK114

Exports:adjust_Fgcompute_MMagics

Dependencies:betaregcodetoolsflexmixforeachFormulaglmnetiteratorslatticelmtestMASSMatrixmodeltoolsnnetRcppRcppEigensandwichshapesurvivalzoo