Package: LongDecompHE 0.1.0
Huiping Zheng
LongDecompHE: Longitudinal Decomposition of Health Expectancy by Age and Cause
Provides tools to decompose differences in cohort health expectancy (HE) by age and cause using longitudinal data. The package implements a novel longitudinal attribution method based on a semiparametric additive hazards model with time-dependent covariates, specifically designed to address interval censoring and semi-competing risks via a copula framework. The resulting age-cause-specific contributions to disability prevalence and death probability can be used to quantify and decompose differences in cohort HE between groups. The package supports stepwise replacement decomposition algorithms and is applicable to cohort-based health disparity research across diverse populations. Related methods include Sun et al. (2023) <doi:10.1177/09622802221133552>.
Authors:
LongDecompHE_0.1.0.tar.gz
LongDecompHE_0.1.0.tar.gz(r-4.7-any)LongDecompHE_0.1.0.tar.gz(r-4.6-any)
LongDecompHE_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
LongDecompHE/json (API)
| # Install 'LongDecompHE' in R: |
| install.packages('LongDecompHE', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- attributionA - Attribution Results for Population A
- attributionB - Attribution Results for Population B
- decom_results - Decomposition Results Comparing Two Populations
- simulated_dataA - Simulated Bivariate Semi-competing Risks Data
- simulated_dataB - Simulated Bivariate Semi-competing Risks Data
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:2b58769858. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 133 | ||
| source / vignettes | OK | 183 | ||
| linux-release-x86_64 | OK | 168 | ||
| wasm-release | OK | 126 |
Exports:Attribution_sullivancopula_additiveDecomp_sullivanPlot.sullivan
Dependencies:ADGofTestcliclustercolorspacecopulacorpcorcpp11dplyrfarvergenericsggplot2gluegslgtableisobandlabelinglatticelifecyclemagrittrMatrixmvtnormnumDerivpatchworkpcaPPpillarpkgconfigpsplinepurrrR6RColorBrewerrlangS7scalesstablediststringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Longitudinal Attribution of Disability and Death Based on Sullivan Method | Attribution_sullivan |
| Attribution Results for Population A | attributionA |
| Attribution Results for Population B | attributionB |
| Copula regression models with semiparametric additive hazards margins for bivariate interval censoring and semi-competing risks. | copula_additive |
| Decomposition Results Comparing Two Populations | decom_results |
| Two-dimensional decomposition of the difference between the two cohort HE by age and cause | Decomp_sullivan |
| Plot Attribution or Decomposition Results Using Sullivan Method | Plot.sullivan |
| Printing outputs of a LongDecompHE object | print.LongDecompHE |
| Simulated Bivariate Semi-competing Risks Data (Set A) | simulated_dataA |
| Simulated Bivariate Semi-competing Risks Data (Set B) | simulated_dataB |
| Summarizing outputs of a LongDecompHE object | summary.LongDecompHE |