{ "_id": "6a587aebff0138dec5d74029", "Package": "LongDecompHE", "Type": "Package", "Title": "Longitudinal Decomposition of Health Expectancy by Age and Cause", "Version": "0.1.0", "Authors@R": "c(\nperson(given = \"Huiping\", family = \"Zheng\", role = c(\"aut\", \"cre\"),\nemail = \"zhenghuiping@ruc.edu.cn\"),\nperson(given = \"Tao\", family = \"Sun\", role = \"aut\"),\nperson(given = \"Xiaojun\", family = \"Wang\", role = \"aut\"))", "Description": "Provides tools to decompose differences in cohort health\nexpectancy (HE) by age and cause using longitudinal data. The\npackage implements a novel longitudinal attribution method\nbased on a semiparametric additive hazards model with\ntime-dependent covariates, specifically designed to address\ninterval censoring and semi-competing risks via a copula\nframework. The resulting age-cause-specific contributions to\ndisability prevalence and death probability can be used to\nquantify and decompose differences in cohort HE between groups.\nThe package supports stepwise replacement decomposition\nalgorithms and is applicable to cohort-based health disparity\nresearch across diverse populations. Related methods include\nSun et al. (2023) .", "License": "GPL (>= 3)", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.3.2", "NeedsCompilation": "no", "Packaged": { "Date": "2026-07-16 06:28:38 UTC", "User": "root" }, "Author": "Huiping Zheng [aut, cre], Tao Sun [aut], Xiaojun Wang [aut]", "Maintainer": "Huiping Zheng ", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2025-07-03 15:20:02 UTC", "RemoteUrl": "https://github.com/cran/LongDecompHE", "RemoteRef": "HEAD", "RemoteSha": "2b58769858f7d5d7293a785993d64887dab32703", "_user": "cran", "_type": "src", "_file": "LongDecompHE_0.1.0.tar.gz", "_fileid": "https://r2.ropensci.org/c56d252737a4a97a476fed75b6316747922502d5f00096bcaba83f3aa92dec33", "_filesize": 180356, "_sha256": "c56d252737a4a97a476fed75b6316747922502d5f00096bcaba83f3aa92dec33", "_expires": "2026-10-24T06:32:09.000Z", "_created": "2026-07-16T06:28:38.000Z", "_published": "2026-07-16T06:32:11.172Z", "_jobs": [ { "job": 87551533779, "time": 133, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "8366909855" }, { "job": 87551533777, "time": 168, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "8366920380" }, { "job": 87551078806, "time": 183, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "8366868972" }, { "job": 87551533776, "time": 126, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "8366907835" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/cran/actions/runs/29476663738", "_status": "success", "_upstream": "https://github.com/cran/LongDecompHE", "_commit": { "id": "2b58769858f7d5d7293a785993d64887dab32703", "author": "Huiping Zheng ", "committer": "cran-robot ", "message": "version 0.1.0\n", "time": 1751556002 }, "_maintainer": { "name": "Huiping Zheng", "email": "zhenghuiping@ruc.edu.cn" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "copula", "role": "Imports" }, { "package": "corpcor", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "patchwork", "role": "Imports" }, { "package": "grDevices", "role": "Imports" }, { "package": "tidyr", "role": "Imports" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "followers": 620, "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 190, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/LongDecompHE" }, "_searchresults": 0, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/LongDecompHE.html", "manual.pdf" ], "_realowner": "cran", "_cranurl": false, "_releases": [ { "version": "0.1.0", "date": "2025-07-03" } ], "_exports": [ "Attribution_sullivan", "copula_additive", "Decomp_sullivan", "Plot.sullivan" ], "_datasets": [ { "name": "attributionA", "title": "Attribution Results for Population A", "object": "attributionA", "class": [ "LongDecompHE" ], "fields": [], "table": false, "tojson": false }, { "name": "attributionB", "title": "Attribution Results for Population B", "object": "attributionB", "class": [ "LongDecompHE" ], "fields": [], "table": false, "tojson": false }, { "name": "decom_results", "title": "Decomposition Results Comparing Two Populations", "object": "decom_results", "class": [ "LongDecompHE" ], "fields": [], "table": false, "tojson": false }, { "name": "simulated_dataA", "title": "Simulated Bivariate Semi-competing Risks Data (Set A)", "object": "simulated_dataA", "class": [ "data.frame" ], "fields": [ "id", "visit", "visit_time", "status", "statusD", "Z1", "Z2", "Z3", "weight" ], "rows": 1947, "table": true, "tojson": true }, { "name": "simulated_dataB", "title": "Simulated Bivariate Semi-competing Risks Data (Set B)", "object": "simulated_dataB", "class": [ "data.frame" ], "fields": [ "id", "visit", "visit_time", "status", "statusD", "Z1", "Z2", "Z3", "weight" ], "rows": 2000, "table": true, "tojson": true } ], "_help": [ { "page": "Attribution_sullivan", "title": "Longitudinal Attribution of Disability and Death Based on Sullivan Method", "topics": [ "Attribution_sullivan" ] }, { "page": "attributionA", "title": "Attribution Results for Population A", "topics": [ "attributionA" ] }, { "page": "attributionB", "title": "Attribution Results for Population B", "topics": [ "attributionB" ] }, { "page": "copula_additive", "title": "Copula regression models with semiparametric additive hazards margins for bivariate interval censoring and semi-competing risks.", "topics": [ "copula_additive" ] }, { "page": "decom_results", "title": "Decomposition Results Comparing Two Populations", "topics": [ "decom_results" ] }, { "page": "Decomp_sullivan", "title": "Two-dimensional decomposition of the difference between the two cohort HE by age and cause", "topics": [ "Decomp_sullivan" ] }, { "page": "Plot.sullivan", "title": "Plot Attribution or Decomposition Results Using Sullivan Method", "topics": [ "Plot.sullivan" ] }, { "page": "print.LongDecompHE", "title": "Printing outputs of a LongDecompHE object", "topics": [ "print.LongDecompHE" ] }, { "page": "simulated_dataA", "title": "Simulated Bivariate Semi-competing Risks Data (Set A)", "topics": [ "simulated_dataA" ] }, { "page": "simulated_dataB", "title": "Simulated Bivariate Semi-competing Risks Data (Set B)", "topics": [ "simulated_dataB" ] }, { "page": "summary.LongDecompHE", "title": "Summarizing outputs of a LongDecompHE object", "topics": [ "summary.LongDecompHE" ] } ], "_rundeps": [ "ADGofTest", "cli", "cluster", "colorspace", "copula", "corpcor", "cpp11", "dplyr", "farver", "generics", "ggplot2", "glue", "gsl", "gtable", "isoband", "labeling", "lattice", "lifecycle", "magrittr", "Matrix", "mvtnorm", "numDeriv", "patchwork", "pcaPP", "pillar", "pkgconfig", "pspline", "purrr", "R6", "RColorBrewer", "rlang", "S7", "scales", "stabledist", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "utf8", "vctrs", "viridisLite", "withr" ], "_score": 1, "_indexed": true, "_nocasepkg": "longdecomphe", "_universes": [ "cran" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.0", "date": "2026-07-16T06:30:40.000Z", "distro": "resolute", "commit": "2b58769858f7d5d7293a785993d64887dab32703", "fileid": "https://r2.ropensci.org/5fd64c8dd2159f84e0cfa19556c357539902c76ae3605053bd715e4bc473c3c5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/29476663738" }, { "r": "4.6.1", "os": "linux", "version": "0.1.0", "date": "2026-07-16T06:30:54.000Z", "distro": "resolute", "commit": "2b58769858f7d5d7293a785993d64887dab32703", "fileid": "https://r2.ropensci.org/894d0eb080657ff2f3c9e270eff3854c9c24a0c00e099e8d319cb8220b30dffa", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/29476663738" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.0", "date": "2026-07-16T06:31:04.000Z", "commit": "2b58769858f7d5d7293a785993d64887dab32703", "fileid": "https://r2.ropensci.org/48c723bccfdc9631d64e722187a0f2bc86819039f9d6b981b92088a1fdc91218", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/29476663738" } ] }