Package: JAGStree 1.0.1

Mallory J Flynn

JAGStree: Automatically Write 'JAGS' Code for Hierarchical Bayesian Models on Trees

When relationships between sources of data can be represented by a tree, the generation of appropriate Markov Chain Monte Carlo modeling code to be used with 'JAGS' to run a Bayesian hierarchical model can be automatically generated by this package. Any admissible tree-structured data can be used, under the assumption that node counts are multinomial and branching probabilities are Dirichlet among sibling groups. The methodological basis used to create this package can be found in Flynn (2023) <http://hdl.handle.net/2429/86174>.

Authors:Mallory J Flynn [cre, aut]

JAGStree_1.0.1.tar.gz
JAGStree_1.0.1.tar.gz(r-4.5-noble)JAGStree_1.0.1.tar.gz(r-4.4-noble)
JAGStree_1.0.1.tgz(r-4.4-emscripten)JAGStree_1.0.1.tgz(r-4.3-emscripten)
JAGStree.pdf |JAGStree.html✨
JAGStree/json (API)
NEWS

# Install 'JAGStree' in R:
install.packages('JAGStree', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/malfly/jagstree/issues

Uses libs:
  • jags– Just Another Gibbs Sampler for Bayesian MCMC
  • c++– GNU Standard C++ Library v3
Datasets:
  • data1 - Simple Tree Data 1
  • data2 - Simple Tree Data 2
  • data3 - Simple Tree Data 3

jagscpp

2.00 score 482 downloads 1 exports 122 dependencies

Last updated 2 months agofrom:ba1a7b6ad7. Checks:OK: 1 NOTE: 1. Indexed: no.

TargetResultDate
Doc / VignettesOKDec 12 2024
R-4.5-linuxNOTEDec 12 2024

Exports:makeJAGStree

Dependencies:abindaskpassAutoWMMbackportsbase64encbitbit64blobbootbroombslibcachemcallrcellrangerclicliprcodacolorspaceconflictedcpp11crayoncurldata.tabledata.treeDBIdbplyrdenstripDiagrammeRdigestdplyrdtplyrevaluatefansifarverfastmapfontawesomeforcatsfsgarglegenericsggplot2gluegoogledrivegooglesheets4gtablegtoolshavenhighrhmshtmltoolshtmlwidgetshttridsigraphisobandjquerylibjsonliteknitrlabelinglatticelifecyclelubridatemagrittrMASSMatrixmcmcplotsmemoisemgcvmimemodelrmunsellnlmeopensslpillarpkgconfigprettyunitsprocessxprogresspspurrrR2jagsR2WinBUGSR6raggrappdirsRColorBrewerreadrreadxlrematchrematch2reprexrjagsrlangrmarkdownrstudioapirvestsassscalesselectrsfsmiscstringistringrsyssystemfontstextshapingtibbletidyrtidyselecttidyversetimechangetinytextzdbutf8uuidvctrsviridisLitevisNetworkvroomwithrxfunxml2yaml

JAGStree: R code that writes 'JAGS' code

Rendered fromJAGStree.Rmdusingknitr::rmarkdownon Dec 12 2024.

Last update: 2024-11-11
Started: 2024-11-11