Package: InflectSSP 1.6

Amber Mosley

InflectSSP: Melt Curve Fitting and Melt Shift Analysis

Analyzes raw abundance data from a cellular thermal shift experiment and calculates melt temperatures and melt shifts for each protein in the experiment. McCracken (2022) <doi:10.1101/2022.12.30.522131>.

Authors:Neil McCracken [aut], Hao Liu [ctb], Amber Mosley [cre]

InflectSSP_1.6.tar.gz
InflectSSP_1.6.tar.gz(r-4.5-noble)InflectSSP_1.6.tar.gz(r-4.4-noble)
InflectSSP_1.6.tgz(r-4.4-emscripten)InflectSSP_1.6.tgz(r-4.3-emscripten)
InflectSSP.pdf |InflectSSP.html
InflectSSP/json (API)

# Install 'InflectSSP' in R:
install.packages('InflectSSP', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Uses libs:
  • openjdk– OpenJDK Java runtime, using Hotspot JIT

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

openjdk

2.00 score 3 scripts 782 downloads 10 exports 66 dependencies

Last updated 2 years agofrom:633aaba14d. Checks:OK: 1 NOTE: 1. Indexed: yes.

TargetResultDate
Doc / VignettesOKDec 01 2024
R-4.5-linuxNOTEDec 01 2024

Exports:CorrectionCurveFit1CurveFit2ImportInflectSSPMeltCalcNormalizeQuantifyReportDataMeltsReportSTRING

Dependencies:askpasscellrangerclicodacolorspacecpp11crayoncurldata.tabledplyrfansifarverforcatsgenericsGGallyggplot2ggstatsgluegtablehmshttrisobandjsonlitelabelinglatticelifecyclemagrittrMASSMatrixmgcvmimemunsellnetworknlmeopensslpatchworkpillarpkgconfigplotrixplyrprettyunitsprogresspurrrR6RColorBrewerRcppreadxlrematchrJavarlangscalesstatnet.commonstringistringrsvglitesyssystemfontstibbletidyrtidyselectutf8vctrsviridisLitewithrxlsxxlsxjars

InflectSSPVignette

Rendered fromInflectSSPVignette.Rmdusingknitr::rmarkdownon Dec 01 2024.

Last update: 2023-02-03
Started: 2021-12-16