Package: GCalcium 1.0.0

Andrew Tamalunas

GCalcium: A Data Manipulation and Analysis Package for Calcium Indicator Data

Provides shortcuts in extracting useful data points and summarizing waveform data. It is optimized for speed to work efficiently with large data sets so you can get to the analysis phase more quickly. It also utilizes a user-friendly format for use by both beginners and seasoned R users.

Authors:Andrew Tamalunas

GCalcium_1.0.0.tar.gz
GCalcium_1.0.0.tar.gz(r-4.5-noble)GCalcium_1.0.0.tar.gz(r-4.4-noble)
GCalcium_1.0.0.tgz(r-4.4-emscripten)GCalcium_1.0.0.tgz(r-4.3-emscripten)
GCalcium.pdf |GCalcium.html✨
GCalcium/json (API)

# Install 'GCalcium' in R:
install.packages('GCalcium', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • GCaMP - Pre-filtered GCaMP calcium activity waveforms

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.90 score 16 scripts 176 downloads 14 exports 18 dependencies

Last updated 6 years agofrom:f353f5b730. Checks:2 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 18 2025
R-4.5-linuxOKFeb 18 2025

Exports:averaged_trialsavg_curve_slopebetween_trial_changecentered_AUCconsecutive_trial_changefind_peaksformat_datainflect_pointsinflect_points_dfmoving_windowperc_baselineplot_trialswithin_trial_changez_score

Dependencies:bitopscaToolsclidplyrfansigenericsgluelifecyclemagrittrpillarpkgconfigR6rlangtibbletidyselectutf8vctrswithr

Working with Waveform Data using GCalcium

Andrew Tamalunas

Rendered fromExamples.Rmdusingknitr::rmarkdownon Feb 18 2025.

Last update: 2019-03-06
Started: 2019-03-06