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  "Package": "GCalcium",
  "Type": "Package",
  "Title": "A Data Manipulation and Analysis Package for Calcium Indicator\nData",
  "Version": "1.0.0",
  "Author": "Andrew Tamalunas",
  "Maintainer": "Andrew Tamalunas <atamalu@g.clemson.edu>",
  "Description": "Provides shortcuts in extracting useful data points and\nsummarizing waveform data. It is optimized for speed to work\nefficiently with large data sets so you can get to the analysis\nphase more quickly. It also utilizes a user-friendly format for\nuse by both beginners and seasoned R users.",
  "License": "GPL-3",
  "Encoding": "UTF-8",
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    "User": "root"
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  "Date/Publication": "2019-03-06 15:53:27 UTC",
  "RemoteUrl": "https://github.com/cran/GCalcium",
  "RemoteRef": "HEAD",
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    "author": "Andrew Tamalunas <atamalu@g.clemson.edu>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.0.0\n",
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    "avg_curve_slope",
    "between_trial_change",
    "centered_AUC",
    "consecutive_trial_change",
    "find_peaks",
    "format_data",
    "inflect_points",
    "inflect_points_df",
    "moving_window",
    "perc_baseline",
    "plot_trials",
    "within_trial_change",
    "z_score"
  ],
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      "name": "GCaMP",
      "title": "Pre-filtered GCaMP calcium activity waveforms",
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      "class": [
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        "array"
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      "rows": 11,
      "table": true,
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      "page": "averaged_trials",
      "title": "Averages signals across trials",
      "topics": [
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      ]
    },
    {
      "page": "avg_curve_slope",
      "title": "Get average curve slopes",
      "topics": [
        "avg_curve_slope"
      ]
    },
    {
      "page": "between_trial_change",
      "title": "Compare mean activity between trials",
      "topics": [
        "between_trial_change"
      ]
    },
    {
      "page": "centered_AUC",
      "title": "Compute centered area under curve",
      "topics": [
        "centered_AUC"
      ]
    },
    {
      "page": "consecutive_trial_change",
      "title": "Compare mean activity in consecutive trials",
      "topics": [
        "consecutive_trial_change"
      ]
    },
    {
      "page": "find_peaks",
      "title": "Get peaks/valleys in waveform data",
      "topics": [
        "find_peaks"
      ]
    },
    {
      "page": "format_data",
      "title": "Reformat and label data into GCalcium format",
      "topics": [
        "format_data"
      ]
    },
    {
      "page": "GCaMP",
      "title": "Pre-filtered GCaMP calcium activity waveforms",
      "topics": [
        "GCaMP"
      ]
    },
    {
      "page": "inflect_points",
      "title": "Find inflection pooints",
      "topics": [
        "inflect_points"
      ]
    },
    {
      "page": "inflect_points_df",
      "title": "Find inflection points and curve numbers",
      "topics": [
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      ]
    },
    {
      "page": "moving_window",
      "title": "Summarize data within windows of time",
      "topics": [
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      ]
    },
    {
      "page": "perc_baseline",
      "title": "Find the percent change from baseline",
      "topics": [
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      ]
    },
    {
      "page": "plot_trials",
      "title": "Plot specified trials",
      "topics": [
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      ]
    },
    {
      "page": "within_trial_change",
      "title": "Get mean activity change within a trial",
      "topics": [
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      ]
    },
    {
      "page": "z_score",
      "title": "Transform values into z scores",
      "topics": [
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      ]
    }
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      "source": "Examples.Rmd",
      "filename": "Examples.html",
      "title": "Working with Waveform Data using GCalcium",
      "author": "Andrew Tamalunas",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Data: GCaMP",
        "Data formatting",
        "Format organized data with format_data",
        "Extracting useful information for analysis",
        "Vector",
        "find_peaks",
        "inflect_points",
        "Matrix or Data frame",
        "averaged_trials",
        "avg_curve_slope",
        "between_trial_change",
        "centered_AUC",
        "consecutive_trial_change",
        "inflect_points_df",
        "moving_window",
        "perc_baseline",
        "within_trial_change",
        "Transformations and filtering",
        "z_score",
        "Plotting",
        "plot_trials"
      ],
      "created": "2019-03-06 15:53:27",
      "modified": "2019-03-06 15:53:27",
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