Package: CleanBSequences 2.3.0

Florencia I. Pozzi

CleanBSequences: Curing of Biological Sequences

Curates biological sequences massively, quickly, without errors and without internet connection. Biological sequences curing is performed by aligning the forward and / or revers primers or ends of cloning vectors with the sequences to be cleaned. After the alignment, new subsequences are generated without biological fragment not desired by the user. Pozzi et al (2020) <doi:10.1007/s00438-020-01671-z>.

Authors:Florencia I. Pozzi, Silvina A. Felitti

CleanBSequences_2.3.0.tar.gz
CleanBSequences_2.3.0.tar.gz(r-4.5-noble)CleanBSequences_2.3.0.tar.gz(r-4.4-noble)
CleanBSequences_2.3.0.tgz(r-4.4-emscripten)
CleanBSequences.pdf |CleanBSequences.html✨
CleanBSequences/json (API)

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4 exports 0.00 score 19 dependencies 425 downloads

Last updated 4 months agofrom:d380c92ecb. Checks:OK: 2. Indexed: yes.

Exports:DNAStringSetOPRDNAStringSetTPROnePrimerRemoveTwoPrimerRemove

Dependencies:askpassBiocGenericsBiostringscrayoncurlGenomeInfoDbGenomeInfoDbDatahttrIRangesjsonlitemimeopensslpwalignR6S4VectorssysUCSC.utilsXVectorzlibbioc