Package: CleanBSequences 2.3.0

Florencia I. Pozzi

CleanBSequences: Curing of Biological Sequences

Curates biological sequences massively, quickly, without errors and without internet connection. Biological sequences curing is performed by aligning the forward and / or revers primers or ends of cloning vectors with the sequences to be cleaned. After the alignment, new subsequences are generated without biological fragment not desired by the user. Pozzi et al (2020) <doi:10.1007/s00438-020-01671-z>.

Authors:Florencia I. Pozzi, Silvina A. Felitti

CleanBSequences_2.3.0.tar.gz
CleanBSequences_2.3.0.zip(r-4.7-any)CleanBSequences_2.3.0.zip(r-4.6-any)
CleanBSequences_2.3.0.tar.gz(r-4.7-any)CleanBSequences_2.3.0.tar.gz(r-4.6-any)
CleanBSequences_2.3.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
CleanBSequences/json (API)

# Install 'CleanBSequences' in R:
install.packages('CleanBSequences', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 304 downloads 4 exports 9 dependencies

Last updated from:d380c92ecb. Checks:6 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK141
source / vignettesOK164
linux-releaseOK127
windows-develOK73
windows-releaseOK107
wasm-releaseOK111

Exports:DNAStringSetOPRDNAStringSetTPROnePrimerRemoveTwoPrimerRemove

Dependencies:BiocGenericsBiostringscrayongenericsIRangespwalignS4VectorsSeqinfoXVector