Package: CleanBSequences 2.3.0

Florencia I. Pozzi

CleanBSequences: Curing of Biological Sequences

Curates biological sequences massively, quickly, without errors and without internet connection. Biological sequences curing is performed by aligning the forward and / or revers primers or ends of cloning vectors with the sequences to be cleaned. After the alignment, new subsequences are generated without biological fragment not desired by the user. Pozzi et al (2020) <doi:10.1007/s00438-020-01671-z>.

Authors:Florencia I. Pozzi, Silvina A. Felitti

CleanBSequences_2.3.0.tar.gz
CleanBSequences_2.3.0.tar.gz(r-4.7-any)CleanBSequences_2.3.0.tar.gz(r-4.6-any)
CleanBSequences_2.3.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
CleanBSequences/json (API)

# Install 'CleanBSequences' in R:
install.packages('CleanBSequences', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 269 downloads 4 exports 9 dependencies

Last updated from:d380c92ecb. Checks:4 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK150
source / vignettesOK177
linux-release-x86_64OK144
wasm-releaseOK100

Exports:DNAStringSetOPRDNAStringSetTPROnePrimerRemoveTwoPrimerRemove

Dependencies:BiocGenericsBiostringscrayongenericsIRangespwalignS4VectorsSeqinfoXVector