{
  "_id": "6a1eec1eb401979e73412480",
  "Package": "CleanBSequences",
  "Type": "Package",
  "Title": "Curing of Biological Sequences",
  "Version": "2.3.0",
  "Author": "Florencia I. Pozzi, Silvina A. Felitti",
  "Maintainer": "Florencia I. Pozzi <florenciapoz@hotmail.com>",
  "Description": "Curates biological sequences massively, quickly, without\nerrors and without internet connection.  Biological sequences\ncuring is performed by aligning the forward and / or revers\nprimers or ends of cloning vectors with the sequences to be\ncleaned. After the alignment, new subsequences are generated\nwithout biological fragment not desired by the user. Pozzi et\nal (2020) <doi:10.1007/s00438-020-01671-z>.",
  "License": "GPL (>= 2)",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.1",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-19 09:30:43 UTC",
    "User": "root"
  },
  "Config/pak/sysreqs": "zlib1g-dev",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2024-05-10 02:40:17 UTC",
  "RemoteUrl": "https://github.com/cran/CleanBSequences",
  "RemoteRef": "HEAD",
  "RemoteSha": "d380c92ecb8b2dcddd28eaac9c37018c5a14ad32",
  "MD5sum": "8904e3e9f7bb2b0035ef6f401d2951d3",
  "_user": "cran",
  "_type": "src",
  "_file": "CleanBSequences_2.3.0.tar.gz",
  "_fileid": "42b6d56a4bbe79df7351408d4c1688e93736c686674dc66637bbb02bec9bd06a",
  "_filesize": 78969,
  "_sha256": "42b6d56a4bbe79df7351408d4c1688e93736c686674dc66637bbb02bec9bd06a",
  "_created": "2026-05-19T09:30:43.000Z",
  "_published": "2026-06-02T14:43:42.557Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79098101987,
      "time": 150,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7079841666"
    },
    {
      "job": 79098102102,
      "time": 144,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7079839143"
    },
    {
      "job": 79098101546,
      "time": 177,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7079787989"
    },
    {
      "job": 79098100879,
      "time": 100,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7361012533"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/26088504126",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/CleanBSequences",
  "_commit": {
    "id": "d380c92ecb8b2dcddd28eaac9c37018c5a14ad32",
    "author": "Florencia I. Pozzi <florenciapoz@hotmail.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 2.3.0\n",
    "time": 1715308817
  },
  "_maintainer": {
    "name": "Florencia I. Pozzi",
    "email": "florenciapoz@hotmail.com"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "pwalign",
      "role": "Depends"
    },
    {
      "package": "Biostrings",
      "role": "Depends"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 269,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/CleanBSequences"
  },
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/CleanBSequences.html",
    "extra/contents.json",
    "manual.pdf"
  ],
  "_realowner": "cran",
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.4.0",
      "date": "2018-05-11"
    },
    {
      "version": "1.4.0",
      "date": "2022-04-27"
    },
    {
      "version": "2.3.0",
      "date": "2024-05-09"
    }
  ],
  "_exports": [
    "DNAStringSetOPR",
    "DNAStringSetTPR",
    "OnePrimerRemove",
    "TwoPrimerRemove"
  ],
  "_help": [
    {
      "page": "DNAStringSetOPR",
      "title": "Curing of biological sequences",
      "topics": [
        "DNAStringSetOPR"
      ]
    },
    {
      "page": "DNAStringSetTPR",
      "title": "Curing of biological sequences",
      "topics": [
        "DNAStringSetTPR"
      ]
    },
    {
      "page": "OnePrimerRemove",
      "title": "Clean biological secuences",
      "topics": [
        "OnePrimerRemove"
      ]
    },
    {
      "page": "TwoPrimerRemove",
      "title": "Clean biological secuences",
      "topics": [
        "TwoPrimerRemove"
      ]
    }
  ],
  "_rundeps": [
    "BiocGenerics",
    "Biostrings",
    "crayon",
    "generics",
    "IRanges",
    "pwalign",
    "S4Vectors",
    "Seqinfo",
    "XVector"
  ],
  "_score": 1,
  "_indexed": true,
  "_nocasepkg": "cleanbsequences",
  "_universes": [
    "cran"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "2.3.0",
      "date": "2026-05-19T09:32:49.000Z",
      "distro": "noble",
      "commit": "d380c92ecb8b2dcddd28eaac9c37018c5a14ad32",
      "fileid": "0dbf1d9b561511521a4a370b7c1b137bf84fd05ab4e4e71dc1436ef8816f9a56",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26088504126"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "2.3.0",
      "date": "2026-05-19T09:32:46.000Z",
      "distro": "noble",
      "commit": "d380c92ecb8b2dcddd28eaac9c37018c5a14ad32",
      "fileid": "6b7fff9d1ade8db8101399338a58b330162aadcc9b6dfb958be1caa9dc8f2c94",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26088504126"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "2.3.0",
      "date": "2026-06-02T14:43:07.000Z",
      "commit": "d380c92ecb8b2dcddd28eaac9c37018c5a14ad32",
      "fileid": "32227217556a5d1f7a23c7d85314d1d5ab187675f4f37049e0e4bff1cb6e2d67",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26088504126"
    }
  ]
}