BioPred Package Tutorial
Introduction | Install from GitHub | Install from CRAN | Loading the Data | Data Description | 1 Example Analysis for Continuous Outcomes | 1.1 Training the XGBoostSub_con Model | 1.2 Evaluating Predictive Biomarker Importance with XGBoostSub_con | 1.3 Obtaining subgroup results with XGBoostSub_con | 1.4 Commonly used subgroup/biomarker analysis tools | 2 Example Analysis for Binary Outcomes | 2.1 Train the XGBoostSub_bin Model | 2.2 Predictive biomarker importance | 2.3 Get subgroup results | 2.4 Post-Hoc analysis based on subgroup and biomarker results | 3 Example Analysis for time-to-event outcome | 3.1 Train the XGBoostSub_sur model | 3.1 Predictive biomarker importance using XGBoostSub_sur | 3.2 Get subgroup results based on XGBoostSub_sur | 4. Other functions for biomarker analysis in clinical practice