Package: BPM 1.0.0

Jianzhao Gao and Xiaodan Fan

BPM: Bayesian Purity Model to Estimate Tumor Purity

Bayesian purity model to estimate tumor purity using methylation array data (DNA methylation Infinium 450K array data) without reference samples.

Authors:Jianzhao Gao, Linghao Shen, Xiaodan Fan

BPM_1.0.0.tar.gz
BPM_1.0.0.tar.gz(r-4.5-noble)BPM_1.0.0.tar.gz(r-4.4-noble)
BPM_1.0.0.tgz(r-4.4-emscripten)BPM_1.0.0.tgz(r-4.3-emscripten)
BPM.pdf |BPM.html✨
BPM/json (API)

# Install 'BPM' in R:
install.packages('BPM', repos = 'https://cloud.r-project.org')
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.00 score 1 stars 193 downloads 13 mentions 3 exports 2 dependencies

Last updated 6 years agofrom:2c0f4e4873. Checks:3 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 23 2025
R-4.5-linuxOKMar 23 2025
R-4.4-linuxOKMar 23 2025

Exports:ApiGetDMCsBayPMfullSampler

Dependencies:limmastatmod

Citation

To cite package ‘BPM’ in publications use:

Gao J, Shen L, Fan X (2018). BPM: Bayesian Purity Model to Estimate Tumor Purity. R package version 1.0.0, https://CRAN.R-project.org/package=BPM.

ATTENTION: This citation information has been auto-generated from the package DESCRIPTION file and may need manual editing, see ‘help("citation")’.

Corresponding BibTeX entry: 

  @Manual{,
    title = {BPM: Bayesian Purity Model to Estimate Tumor Purity},
    author = {Jianzhao Gao and Linghao Shen and Xiaodan Fan},
    year = {2018},
    note = {R package version 1.0.0},
    url = {https://CRAN.R-project.org/package=BPM},
  }