Introduction and overview | Use of package functions with examples | The main function BHMSMA | Reading fMRI Data: readfmridata | Temporal modeling through GLM: glmcoef | Wavelet transform of the GLM coefficients: waveletcoef | Estimating the model hyperparameters: hyperest | Computing posterior distribution of the wavelet coefficients: postmixprob, postwaveletcoef | Computing posterior mean of the regression coefficients: postglmcoef | Posterior simulation and uncertainty estimation: postsamples | Posterior group estimates: postgroupglmcoef | References
This package is considered a duplicate. The official version of this package is found at:https://nilotpalsanyal.r-universe.dev/BHMSMAfMRI
Package: BHMSMAfMRI 2.3
Nilotpal Sanyal
BHMSMAfMRI: Bayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI (fMRI) Data
Package BHMSMAfMRI performs Bayesian hierarchical multi-subject multiscale analysis of fMRI data as described in Sanyal & Ferreira (2012) <doi:10.1016/j.neuroimage.2012.08.041>, or other multiscale data, using wavelet-based prior that borrows strength across subjects and provides posterior smoothed images of the effect sizes and samples from the posterior distribution.
Authors:
BHMSMAfMRI_2.3.tar.gz
BHMSMAfMRI_2.3.zip(r-4.7-x86_64)BHMSMAfMRI_2.3.zip(r-4.7-arm64)BHMSMAfMRI_2.3.zip(r-4.6-x86_64)BHMSMAfMRI_2.3.zip(r-4.6-arm64)
BHMSMAfMRI_2.3.tar.gz(r-4.7-arm64)BHMSMAfMRI_2.3.tar.gz(r-4.7-x86_64)BHMSMAfMRI_2.3.tar.gz(r-4.6-arm64)BHMSMAfMRI_2.3.tar.gz(r-4.6-x86_64)
BHMSMAfMRI_2.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
BHMSMAfMRI/json (API)
| # Install 'BHMSMAfMRI' in R: |
| install.packages('BHMSMAfMRI', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/nilotpalsanyal/bhmsmafmri/issues
Pkgdown/docs site:https://nilotpalsanyal.github.io
Uses libs:
Datasets:
- fmridata - A simulated fMRI data for 3 subjects
Last updated from:6ecb1a6892. Checks:8 WARNING, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | WARNING | 104 | ||
| linux-devel-x86_64 | WARNING | 131 | ||
| source / vignettes | OK | 189 | ||
| linux-release-arm64 | WARNING | 97 | ||
| linux-release-x86_64 | WARNING | 124 | ||
| windows-devel-arm64 | WARNING | 205 | ||
| windows-devel-x86_64 | WARNING | 158 | ||
| windows-release-arm64 | WARNING | 203 | ||
| windows-release-x86_64 | WARNING | 178 | ||
| wasm-release | OK | 101 |
Exports:BHMSMAglmcoefhyperparamestpostglmcoefpostgroupglmcoefpostmixprobpostsamplespostwaveletcoefreadfmridatasubstituteWaveletCoefwaveletcoef
Dependencies:abindbitopsMASSoro.niftiRcppRcppArmadilloRNiftiwavethresh
