Package: wpeR 0.2.0

Gregor Simcic

wpeR: Streamlined Analysis of Wild Pedigree Data

Analyzing pedigree data of wild populations. While primarily designed to process outputs from the 'COLONY' (Jones & Wang (2010) <doi:10.1111/j.1755-0998.2009.02787.x>) pedigree reconstruction software, it can also accommodate data from other sources. By linking reconstructed pedigrees with genetic sample metadata, 'wpeR' produces spatial and temporal visualizations as well as tabular summaries that support interpretation of family structures and dynamics. The main goal of the package is to provide a solution for the analysis of complex wild pedigree data and to help the user to gain insights into genetic relationships within wild animal populations.

Authors:Tomaz Skrbinsek [aut], Gregor Simcic [aut, cre]

wpeR_0.2.0.tar.gz
wpeR_0.2.0.tar.gz(r-4.7-any)wpeR_0.2.0.tar.gz(r-4.6-any)
wpeR_0.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
wpeR/json (API)
NEWS

# Install 'wpeR' in R:
install.packages('wpeR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/gr3602/wper/issues

Pkgdown/docs site:https://gr3602.github.io

Datasets:

On CRAN:

Conda:

3.00 score 2 scripts 166 downloads 10 exports 37 dependencies

Last updated from:65d3be2215. Checks:4 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK140
source / vignettesOK576
linux-release-x86_64OK163
wasm-releaseOK145

Exports:anim_timespancheck_sampledatadyn_matrixget_colonyget_pednbtw_seasonsorg_famsped_satplotped_spatialplot_table

Dependencies:classclassIntclicpp11DBIdplyre1071farvergenericsggplot2gluegtableisobandKernSmoothlabelinglifecyclemagrittrMASSpillarpkgconfigproxyR6RColorBrewerRcpprlangs2S7scalessftibbletidyselectunitsutf8vctrsviridisLitewithrwk

Introduction to wpeR package

Rendered fromwpeR.Rmdusingknitr::rmarkdownon Jun 11 2026.

Last update: 2026-06-11
Started: 2025-07-14