This package is considered a duplicate. The official version of this package is found at:https://darwin-eu.r-universe.dev/visOmopResults

Package: visOmopResults 1.0.0

Núria Mercadé-Besora

visOmopResults: Graphs and Tables for OMOP Results

Provides methods to transform omop_result objects into formatted tables and figures, facilitating the visualisation of study results working with the Observational Medical Outcomes Partnership (OMOP) Common Data Model.

Authors:Martí Català [aut], Núria Mercadé-Besora [aut, cre], Yuchen Guo [ctb], Elin Rowlands [ctb], Edward Burn [ctb]

visOmopResults_1.0.0.tar.gz
visOmopResults_1.0.0.tar.gz(r-4.5-noble)visOmopResults_1.0.0.tar.gz(r-4.4-noble)
visOmopResults_1.0.0.tgz(r-4.4-emscripten)visOmopResults_1.0.0.tgz(r-4.3-emscripten)
visOmopResults.pdf |visOmopResults.html✨
visOmopResults/json (API)
NEWS

# Install 'visOmopResults' in R:

install.packages('visOmopResults', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/darwin-eu/visomopresults/issues

Pkgdown site:https://darwin-eu.github.io

5.85 score 5 packages 53 scripts 1.1k downloads 43 exports 26 dependencies

Last updated 1 months agofrom:6660db3708. Checks:1 OK, 1 NOTE. Indexed: no.

Target	Result	Latest binary
Doc / Vignettes	OK	Feb 15 2025
R-4.5-linux	NOTE	Feb 15 2025

Exports:additionalColumns addSettings barPlot bind boxPlot customiseText emptyPlot emptyTable exportSummarisedResult filterAdditional filterGroup filterSettings filterStrata formatEstimateName formatEstimateValue formatHeader formatTable groupColumns importSummarisedResult mockSummarisedResult pivotEstimates plotColumns scatterPlot settings settingsColumns splitAdditional splitAll splitGroup splitStrata strataColumns suppress tableColumns tableOptions tableStyle tableType themeVisOmop tidy tidyColumns uniteAdditional uniteGroup uniteStrata visOmopTable visTable

Dependencies:blob cli cpp11 DBI dbplyr dplyr fansi generics glue lifecycle magrittr omopgenerics pillar pkgconfig purrr R6 rlang snakecase stringi stringr tibble tidyr tidyselect utf8 vctrs withr

Tables

Rendered froma01_tables.Rmdusingknitr::rmarkdownon Feb 15 2025.

Last update: 2025-01-15
Started: 2025-01-15

Plots

Rendered froma02_plots.Rmdusingknitr::rmarkdownon Feb 15 2025.

Last update: 2025-01-15
Started: 2025-01-15

Citation

Readme and manuals

Help Manual

Help page	Topics
Create a bar plot visualisation from a <summarised_result> object	barPlot
Create a box plot visualisation from a <summarised_result> object	boxPlot
Apply styling to text or column names	customiseText
Returns an empty plot	emptyPlot
Returns an empty table	emptyTable
Formats estimate_name and estimate_value column	formatEstimateName
Formats the estimate_value column	formatEstimateValue
Create a header for gt and flextable objects	formatHeader
Creates a flextable or gt object from a dataframe	formatTable
A <summarised_result> object filled with mock data	mockSummarisedResult
Columns for the plot functions	plotColumns
Create a scatter plot visualisation from a <summarised_result> object	scatterPlot
Columns for the table functions	tableColumns
Additional table formatting options for 'visOmopTable()' and 'visTable()'	tableOptions
Supported predefined styles for formatted tables	tableStyle
Supported table classes	tableType
Apply visOmopResults default styling to a ggplot	themeVisOmop
Format a <summarised_result> object into a gt, flextable, or tibble object	visOmopTable
Generate a formatted table from a <data.table>	visTable