Package: vcrpart 1.0-6

Reto Burgin

vcrpart: Tree-Based Varying Coefficient Regression for Generalized Linear and Ordinal Mixed Models

Recursive partitioning for varying coefficient generalized linear models and ordinal linear mixed models. Special features are coefficient-wise partitioning, non-varying coefficients and partitioning of time-varying variables in longitudinal regression. A description of a part of this package was published by Burgin and Ritschard (2017) <doi:10.18637/jss.v080.i06>.

Authors:Reto Burgin [aut, cre], Gilbert Ritschard [ctb]

vcrpart_1.0-6.tar.gz
vcrpart_1.0-6.tar.gz(r-4.5-noble)vcrpart_1.0-6.tar.gz(r-4.4-noble)
vcrpart_1.0-6.tgz(r-4.4-emscripten)vcrpart_1.0-6.tgz(r-4.3-emscripten)
vcrpart.pdf |vcrpart.html
vcrpart/json (API)
NEWS

# Install 'vcrpart' in R:
install.packages('vcrpart', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Uses libs:
  • openblas– Optimized BLAS
Datasets:
  • PL - Effect of parental leave policy
  • movie - Movie critics
  • poverty - Poverty in Switzerland
  • schizo - National Institute of Mental Health shizophrenia study
  • unemp - Synthetic data sets
  • vcrpart_1 - Synthetic data sets
  • vcrpart_2 - Synthetic data sets
  • vcrpart_3 - Synthetic data sets

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.62 score 21 scripts 355 downloads 43 exports 17 dependencies

Last updated 2 months agofrom:479b716a6c. Checks:OK: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKNov 04 2024
R-4.5-linux-x86_64OKNov 04 2024

Exports:adjacentbaselinececontr.wsumcumulativecvlossextractfefixeffolds_controlfvcglmfvcglm_controlfvcmfvcm_controlfvcolmmfvcolmm_controlgeneglogLik2olmmolmm_contrololmm_estfunolmm_gefpooblossotsplototsplot_controlotsplot_filterpanel_coefpanel_partdeppredecor_controlpruneprunepathranefranefCovresplitpathtvcglmtvcglm_controltvcmtvcm_controltvcolmmtvcolmm_controlVarCorrvc

Dependencies:Formulaformula.toolsinumlatticelibcoinMatrixmvtnormnlmenumDerivoperator.toolspartykitrpartsandwichstrucchangesurvivalucminfzoo

Readme and manuals

Help Manual

Help pageTopics
Contrast matricescontr.wsum
Bagging and Random Forests based on 'tvcm'fvcglm fvcglm_control fvcm fvcm_control fvcolmm fvcolmm_control
Methods for 'fvcm' objectsfitted.fvcm fvcm-methods oobloss.fvcm plot.fvcm predict.fvcm print.fvcm ranef.fvcm
Movie criticsmovie
Fitting ordinal and nominal two-stage linear mixed modelsadjacent baseline cumulative family.olmm olmm
Control parameters for 'olmm'.olmm-control olmm_control
Methods for score processes of 'olmm' objectsolmm-gefp olmm_estfun olmm_gefp predecor_control
Methods for 'olmm' objectsanova.olmm coef.olmm coefficients.olmm deviance.olmm fixef fixef.glm fixef.olmm formula.olmm getCall.olmm logLik.olmm model.frame.olmm model.matrix.olmm neglogLik2 neglogLik2.olmm olmm-methods print.VarCorr.olmm ranef ranef.olmm ranefCov ranefCov.olmm resid.olmm residuals.olmm simulate.olmm terms.olmm update.olmm VarCorr VarCorr.olmm vcov.olmm weights.olmm
Predict outcome probabilities and responses for 'olmm' objectsfitted.olmm olmm-predict predict.olmm
Printing and summarizing 'olmm' objectsolmm-summary print.olmm print.summary.olmm summary.olmm
Time-series plot for longitudinal ordinal dataotsplot otsplot.default otsplot_control otsplot_filter
Effect of parental leave policyPL
Poverty in Switzerlandpoverty
National Institute of Mental Health shizophrenia studyschizo
Coefficient-wise tree-based varying coefficient regression based on generalized linear modelstvcglm tvcglm_control
Tree-based varying coefficient regression modelstvcm
Model selection utility functions for 'tvcm' objects.cvloss cvloss.tvcm folds_control oobloss oobloss.tvcm plot.cvloss.tvcm prune prune.tvcm prunepath prunepath.tvcm tvcm-assessment
Control parameters for 'tvcm'.tvcm-control tvcm_control
Methods for 'tvcm' objectscoef.tvcm coefficients.tvcm depth.tvcm extract extract.tvcm fitted.tvcm formula.tvcm getCall.tvcm logLik.tvcm model.frame.tvcm neglogLik2.tvcm nobs.tvcm predict.tvcm print.tvcm ranef.tvcm resid.tvcm residuals.tvcm splitpath splitpath.tvcm summary.tvcm tvcm-methods weights.tvcm width.tvcm
'plot' method for 'tvcm' objects.panel_coef panel_partdep plot.tvcm tvcm-plot
Tree-based varying coefficient regression based on ordinal and nominal two-stage linear mixed models.tvcolmm tvcolmm_control
Synthetic data setsunemp vcrpart-demo vcrpart_1 vcrpart_2 vcrpart_3
Special terms for formulas.ce fe ge re vc vcrpart-formula