Package: uHMM 1.0
Paul TERNYNCK
uHMM: Construct an Unsupervised Hidden Markov Model
Construct a Hidden Markov Model with states learnt by unsupervised classification.
Authors:
uHMM_1.0.tar.gz
uHMM_1.0.tar.gz(r-4.5-noble)uHMM_1.0.tar.gz(r-4.4-noble)
uHMM_1.0.tgz(r-4.4-emscripten)uHMM_1.0.tgz(r-4.3-emscripten)
uHMM.pdf |uHMM.html✨
uHMM/json (API)
| # Install 'uHMM' in R: |
| install.packages('uHMM', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- MarelCarnot - MarelCarnot dataset
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 9 years agofrom:89a6509b2c. Checks:OK: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 31 2024 |
| R-4.5-linux | OK | Oct 31 2024 |
Exports:computeGapcutCalculationemissionMatrixFastSpectralNJWHMMparamsKmeansAutoElbowKpartitionNJWselfKNNspectralPamClusteringNgtransitionMatrixuHMMinterfaceZPGaussianSimilarity
Dependencies:abindbackportsbase64encbootbroombslibcachemcarcarDatachronclasscliclusterclValidcolorspacecorrplotcowplotcpp11crosstalkDerivdigestdoBydplyrDTellipseemmeansestimabilityevaluateFactoMineRfansifarverfastmapflashClustfontawesomeFormulafsgenericsggplot2ggrepelgluegtablehighrHMMhtmltoolshtmlwidgetshttpuvisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevalleapslifecyclelme4magrittrMASSMatrixMatrixModelsmemoisemgcvmicrobenchmarkmimeminqamodelrmultcompViewmunsellmvtnormnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigpromisespurrrquantregR6rappdirsRColorBrewerRcppRcppEigenrlangrmarkdownsassscalesscatterplot3dSparseMstringistringrsurvivaltcltk2tibbletidyrtidyselecttinytextkrplotutf8vctrsviridisLitewithrxfunyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Construct an unsupervised Hidden Markov Model | uHMM-package |
| Compute gap between eigenvalues of a similarity matrix | computeGap |
| cutCalculation function | cutCalculation |
| Emission matrix estimation | emissionMatrix |
| Jordan Fast Spectral Algorithm | FastSpectralNJW |
| Hidden Markov Model parameter estimation | HMMparams |
| KmeansAutoElbow function | KmeansAutoElbow |
| KpartitionNJW function | KpartitionNJW |
| MarelCarnot dataset | MarelCarnot |
| Self KNN | selfKNN |
| spectralPamClusteringNg function | spectralPamClusteringNg |
| Transition matrix estimation | transitionMatrix |
| Graphical Interface to Build an uHMM | uHMMinterface |
| Similarity matrix with local scale parameter | ZPGaussianSimilarity |