Package: treelayout 0.1.0

Guangchuang Yu

treelayout: Tree Layout Algorithms for Phylogenetic Trees and Other Tree-Like Structures

Computes node coordinates for phylogenetic trees and other tree-like structures. Given a tree, returns one row per node with x and y coordinates, ready for plotting by any graphics system. This is the layout engine used by the 'ggtree' package, extracted so that the coordinate computation can be used without a plotting dependency.

Authors:Guangchuang Yu [aut, cre, cph]

treelayout_0.1.0.tar.gz
treelayout_0.1.0.zip(r-4.7-x86_64)treelayout_0.1.0.zip(r-4.7-arm64)treelayout_0.1.0.zip(r-4.6-x86_64)treelayout_0.1.0.zip(r-4.6-arm64)
treelayout_0.1.0.tar.gz(r-4.7-arm64)treelayout_0.1.0.tar.gz(r-4.7-x86_64)treelayout_0.1.0.tar.gz(r-4.6-arm64)treelayout_0.1.0.tar.gz(r-4.6-x86_64)
treelayout_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
treelayout/json (API)

# Install 'treelayout' in R:
install.packages('treelayout', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/yulab-smu/treelayout/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

cpp

1.00 score 11 exports 30 dependencies

Last updated from:cdde181d4a. Checks:10 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK125
linux-devel-x86_64OK151
source / vignettesOK215
linux-release-arm64OK122
linux-release-x86_64OK177
windows-devel-arm64OK240
windows-devel-x86_64OK260
windows-release-arm64OK244
windows-release-x86_64OK216
wasm-releaseOK101

Exports:calculate_anglecalculate_branch_midclade_geometryDate2decimaldecimal2Dateget_layoutgetXcoord2getYcoordlayout_namesre_assign_ycoord_dftree_layout

Dependencies:apeclicpp11digestdplyrfsgenericsgluelatticelazyevallifecyclemagrittrnlmepillarpkgconfigpurrrR6rappdirsRcpprlangstringistringrtibbletidyrtidyselecttidytreeutf8vctrswithryulab.utils