Package: tramME 1.0.7
tramME: Transformation Models with Mixed Effects
Likelihood-based estimation of mixed-effects transformation models using the Template Model Builder ('TMB', Kristensen et al., 2016) <doi:10.18637/jss.v070.i05>. The technical details of transformation models are given in Hothorn et al. (2018) <doi:10.1111/sjos.12291>. Likelihood contributions of exact, randomly censored (left, right, interval) and truncated observations are supported. The random effects are assumed to be normally distributed on the scale of the transformation function, the marginal likelihood is evaluated using the Laplace approximation, and the gradients are calculated with automatic differentiation (Tamasi & Hothorn, 2021) <doi:10.32614/RJ-2021-075>. Penalized smooth shift terms can be defined using 'mgcv'.
Authors:
tramME_1.0.7.tar.gz
tramME_1.0.7.tar.gz(r-4.5-noble)tramME_1.0.7.tar.gz(r-4.4-noble)
tramME_1.0.7.tgz(r-4.4-emscripten)
tramME.pdf |tramME.html✨
tramME/json (API)
NEWS
# Install 'tramME' in R: |
install.packages('tramME', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://r-forge.r-project.org/projects/ctm
Last updated 7 days agofrom:628d0fbcef. Checks:OK: 2. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 30 2024 |
R-4.5-linux-x86_64 | OK | Nov 30 2024 |
Exports:BoxCoxMEColrMECoxphMEedf_smoothLehmannMELmMEoptim_controlPolrMEranefRespsmooth_termsSurvregMEtramMEtramTMBVarCorrvarcovvarcov<-
Dependencies:alabamabasefunBBcodetoolsconeprojFormulalatticeMASSMatrixmgcvmltmultcompmvtnormnlmenloptrnumDerivorthopolynompolynomquadprogrbibutilsRcppRcppArmadilloRcppEigenRdpackreformulassandwichsurvivalTH.dataTMBtramvariableszoo
Examples in statistical ecology
Rendered frommixed-effects-additive-models.Rnw
usingknitr::knitr
on Nov 30 2024.Last update: 2023-04-04
Started: 2022-04-12
Mixed-effects Additive Transformation Models with the R Package tramME
Rendered fromtramME-JSS.Rnw
usingknitr::knitr
on Nov 30 2024.Last update: 2024-11-29
Started: 2024-11-29
R Journal 2021
Rendered fromRJ-2021-075.Rnw
usingknitr::knitr
on Nov 30 2024.Last update: 2024-07-03
Started: 2022-04-12