Sample Data | Calculating DMFT | Stratification | Separate Root Caries | Calculating DMFS | Drawing a Single Tooth | Odontogram Heatmaps | Preparing data | Basic odontogram | With root surfaces (RB and RL) | No surface labels | FDI tooth numbering | Fixed colour scale | Stratified by treatment arm | Custom strata labels | Summary statistics per stratum | Significance testing with p-value stars | Footnote | Primary Dentition | Tooth Numbering Conversion | Tooth Configuration
Package: tooth 0.5.0
David Selvaraj
tooth: Dental Public Health Indices and Odontogram Visualizations
Computes dental caries indices (DMFT, DMFS, dmft, dmfs) from surface-level clinical examination data and produces odontogram heatmap visualizations of per-tooth-surface outcomes. Supports primary and permanent dentition with configurable teeth per quadrant (5 to 8), separate root and coronal caries tallying, long and wide input formats, stratified output, and FDI/Universal/quadrant tooth numbering conversion.
Authors:
tooth_0.5.0.tar.gz
tooth_0.5.0.tar.gz(r-4.7-any)tooth_0.5.0.tar.gz(r-4.6-any)
tooth_0.5.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
tooth/json (API)
| # Install 'tooth' in R: |
| install.packages('tooth', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ddmsel/tooth/issues
Datasets:
- sim_exam - Simulated dental examination data
Last updated from:769d052959. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 156 | ||
| source / vignettes | OK | 270 | ||
| linux-release-x86_64 | OK | 149 | ||
| wasm-release | OK | 119 |
Exports:build_odontogrambuild_odontographcalc_dmfscalc_dmftdraw_toothpivot_to_longsummarise_dmfttooth_configtooth_convert
Dependencies:clicpp11dplyrfarvergenericsggplot2gluegtableisobandlabelinglifecyclemagrittrpatchworkpillarpkgconfigpurrrR6RColorBrewerrlangS7scalestibbletidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Build a surface-level odontogram heatmap | build_odontogram |
| Calculate DMFS / dmfs index from surface-level data | calc_dmfs |
| Calculate DMFT / dmft index from surface- or tooth-level data | calc_dmft |
| Draw a single tooth as polygon geometry | draw_tooth |
| Pivot wide tooth data to long format | pivot_to_long |
| Simulated dental examination data | sim_exam |
| Summarise DMFT results by group | summarise_dmft |
| Generate tooth configuration for an arch | tooth_config |
| Convert between tooth numbering systems | tooth_convert |
