This package is considered a duplicate. The official version of this package is found at:https://vast-lib.r-universe.dev/tinyVAST

Package: tinyVAST 1.0.0

James T. Thorson

tinyVAST: Multivariate Spatio-Temporal Models using Structural Equations

Fits a wide variety of multivariate spatio-temporal models with simultaneous and lagged interactions among variables (including vector autoregressive spatio-temporal ('VAST') dynamics) for areal, continuous, or network spatial domains. It includes time-variable, space-variable, and space-time-variable interactions using dynamic structural equation models ('DSEM') as expressive interface, and the 'mgcv' package to specify splines via the formula interface. See Thorson et al. (2024) <doi:10.48550/arXiv.2401.10193> for more details.

Authors:James T. Thorson [aut, cre], Sean C. Anderson [aut]

tinyVAST_1.0.0.tar.gz
tinyVAST_1.0.0.tar.gz(r-4.5-noble)tinyVAST_1.0.0.tar.gz(r-4.4-noble)
tinyVAST_1.0.0.tgz(r-4.4-emscripten)tinyVAST_1.0.0.tgz(r-4.3-emscripten)
tinyVAST.pdf |tinyVAST.html✨
tinyVAST/json (API)
NEWS

# Install 'tinyVAST' in R:

install.packages('tinyVAST', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/vast-lib/tinyvast/issues

Pkgdown site:https://vast-lib.github.io

Uses libs:

c++– GNU Standard C++ Library v3

Datasets:

bering_sea - Survey domain for the eastern and northern Bering Sea surveys
bering_sea_pollock_ages - Survey catch-rates at age for Alaska pollock in the Eastern and Northern Bering Sea
bering_sea_pollock_vast - Estimated proportion-at-age for Alaska pollock using VAST
condition_and_density - Condition and density example
red_snapper - Presence/absence, count, and biomass data for red snapper
red_snapper_shapefile - Shapefile for red snapper analysis
salmon_returns - North Pacific salmon returns
sea_ice - Arctic September sea ice concentrations

On CRAN:

cpp

2.85 score 22 exports 67 dependencies

Last updated 2 days agofrom:b5cb441404. Checks:3 OK. Indexed: no.

Target	Result	Latest binary
Doc / Vignettes	OK	Mar 13 2025
R-4.5-linux-x86_64	OK	Mar 13 2025
R-4.4-linux-x86_64	OK	Mar 13 2025

Exports:add_predictions cAIC delta_gamma delta_lognormal deviance_explained integrate_output lognormal make_dsem_ram make_eof_ram make_sem_ram nbinom1 nbinom2 reload_model rmvnorm_prec rotate_pca sample_variable sfnetwork_evaluator sfnetwork_mesh simulate_sfnetwork tinyVAST tinyVASTcontrol tweedie

Dependencies:abind arm assertthat backports boot checkmate class classInt cli clisymbols coda corpcor cpp11 crayon DBI dplyr e1071 fansi fishMod fmesher generics geometries glue igraph KernSmooth lattice lifecycle lme4 lwgeom magrittr MASS Matrix mgcv mi minqa mvtnorm nlme nloptr pillar pkgconfig proxy purrr R6 rbibutils Rcpp RcppEigen Rdpack reformulas rlang s2 sdmTMB sem sf sfheaders sfnetworks stringi stringr tibble tidygraph tidyr tidyselect TMB units utf8 vctrs withr wk