Package: tgstat 2.3.28

Aviezer Lifshitz

tgstat: Amos Tanay's Group High Performance Statistical Utilities

A collection of high performance utilities to compute distance, correlation, auto correlation, clustering and other tasks. Contains graph clustering algorithm described in "MetaCell: analysis of single-cell RNA-seq data using K-nn graph partitions" (Yael Baran, Akhiad Bercovich, Arnau Sebe-Pedros, Yaniv Lubling, Amir Giladi, Elad Chomsky, Zohar Meir, Michael Hoichman, Aviezer Lifshitz & Amos Tanay, 2019 <doi:10.1186/s13059-019-1812-2>).

Authors:Michael Hoichman [aut], Aviezer Lifshitz [aut, cre]

tgstat_2.3.28.tar.gz
tgstat_2.3.28.tar.gz(r-4.5-noble)tgstat_2.3.28.tar.gz(r-4.4-noble)
tgstat_2.3.28.tgz(r-4.4-emscripten)tgstat_2.3.28.tgz(r-4.3-emscripten)
tgstat.pdf |tgstat.html✨
tgstat/json (API)
NEWS

# Install 'tgstat' in R:
install.packages('tgstat', repos = 'https://cloud.r-project.org')

Bug tracker:https://github.com/tanaylab/tgstat/issues

Pkgdown site:https://tanaylab.github.io

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

openblascpp

2.48 score 1 stars 1 packages 361 downloads 9 exports 0 dependencies

Last updated 6 months agofrom:4a2edbf80a. Checks:3 OK. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKMar 23 2025
R-4.5-linux-x86_64OKMar 23 2025
R-4.4-linux-x86_64OKMar 23 2025

Exports:tgs_cortgs_cor_knntgs_disttgs_finitetgs_graphtgs_graph_covertgs_graph_cover_resampletgs_knntgs_matrix_tapply

Dependencies:

manual

Rendered frommanual.Rmdusingknitr::rmarkdownon Mar 23 2025.

Last update: 2022-11-24
Started: 2022-04-14

Citation

To cite package ‘tgstat’ in publications use:

Hoichman M, Lifshitz A (2024). tgstat: Amos Tanay's Group High Performance Statistical Utilities. R package version 2.3.28, https://CRAN.R-project.org/package=tgstat.

Corresponding BibTeX entry: 

  @Manual{,
    title = {tgstat: Amos Tanay's Group High Performance Statistical
      Utilities},
    author = {Michael Hoichman and Aviezer Lifshitz},
    year = {2024},
    note = {R package version 2.3.28},
    url = {https://CRAN.R-project.org/package=tgstat},
  }