Package: surveyvoi 1.0.6

Jeffrey O Hanson

surveyvoi: Survey Value of Information

Decision support tool for prioritizing sites for ecological surveys based on their potential to improve plans for conserving biodiversity (e.g. plans for establishing protected areas). Given a set of sites that could potentially be acquired for conservation management, it can be used to generate and evaluate plans for surveying additional sites. Specifically, plans for ecological surveys can be generated using various conventional approaches (e.g. maximizing expected species richness, geographic coverage, diversity of sampled environmental algorithms. After generating such survey plans, they can be evaluated using conditions) and maximizing value of information. Please note that several functions depend on the 'Gurobi' optimization software (available from <https://www.gurobi.com>). Additionally, the 'JAGS' software (available from <https://mcmc-jags.sourceforge.io/>) is required to fit hierarchical generalized linear models. For further details, see Hanson et al. (2022) <doi:10.1111/1365-2664.14309>.

Authors:Jeffrey O Hanson [aut, cre], Iadine Chadès [aut], Emma J Hudgins [aut], Joseph R Bennett [aut]

surveyvoi_1.0.6.tar.gz
surveyvoi_1.0.6.tar.gz(r-4.5-noble)surveyvoi_1.0.6.tar.gz(r-4.4-noble)
surveyvoi.pdf |surveyvoi.html
surveyvoi/json (API)
NEWS

# Install 'surveyvoi' in R:
install.packages('surveyvoi', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/prioritizr/surveyvoi/issues

Uses libs:
  • gmp– Multiprecision arithmetic library
  • mpfr4– Multiple precision floating-point computation
  • c++– GNU Standard C++ Library v3
Datasets:

gmpmpfr4cpp

2.70 score 5 scripts 665 downloads 18 exports 71 dependencies

Last updated 9 months agofrom:8fb08c171e. Checks:ERROR: 1 OK: 1. Indexed: no.

TargetResultDate
Doc / VignettesFAILNov 25 2024
R-4.5-linux-x86_64OKNov 25 2024

Exports:approx_evdsiapprox_near_optimal_survey_schemeapprox_optimal_survey_schemeenv_div_survey_schemeevdcievdsifeasible_survey_schemesfit_hglm_occupancy_modelsfit_xgb_occupancy_modelsgeo_cov_survey_schemen_statesoptimal_survey_schemeprior_probability_matrixrelative_site_richness_scoresrelative_site_uncertainty_scoressimulate_feature_datasimulate_site_dataweighted_survey_scheme

Dependencies:assertthatbackportscheckmateclassclassIntcliclustercodetoolscolorspacecpp11crayondata.tableDBIdoParalleldplyre1071fansifarverforeachgenericsgluegmpgroupdata2hmsiteratorsjsonliteKernSmoothlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmenloptrnumberspermutepillarpkgconfigplyrPoissonBinomialprettyunitsprogressproxypurrrR6RColorBrewerRcppRcppAlgosRcppEigenrearrrrlangRsymphonys2scalessfstringistringrtibbletidyrtidyselectunitsutf8vctrsveganviridisLitewithrwkxgboost

surveyvoi: Survey Value of Information

Rendered fromsurveyvoi.Rmdusingknitr::rmarkdown_notangleon Nov 25 2024.

Last update: 2024-02-17
Started: 2021-05-27