Package: survSNP 0.26

Alexander Sibley

survSNP: Power Calculations for SNP Studies with Censored Outcomes

Conduct asymptotic and empirical power and sample size calculations for Single-Nucleotide Polymorphism (SNP) association studies with right censored time to event outcomes.

Authors:Kouros Owzar, Zhiguo Li, Nancy Cox, Sin-Ho Jung and Chanhee Yi

survSNP_0.26.tar.gz
survSNP_0.26.tar.gz(r-4.5-noble)survSNP_0.26.tar.gz(r-4.4-noble)
survSNP_0.26.tgz(r-4.4-emscripten)survSNP_0.26.tgz(r-4.3-emscripten)
survSNP.pdf |survSNP.html✨
survSNP/json (API)
NEWS

# Install 'survSNP' in R:
install.packages('survSNP', repos = 'https://cloud.r-project.org')
Uses libs:
  • gsl– GNU Scientific Library (GSL)
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

gslcpp

2.60 score 354 downloads 4 mentions 7 exports 8 dependencies

Last updated 2 years agofrom:4b869b09f2. Checks:3 OK. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKMar 10 2025
R-4.5-linux-x86_64OKMar 10 2025
R-4.4-linux-x86_64OKMar 10 2025

Exports:asypowcensbndhwesim.snp.expsurv.powersim.snp.expsurv.sctestsurv.exp.gt.modelsurvSNP.power.table

Dependencies:codetoolsforeachiteratorslatticeMatrixRcppsurvivalxtable

survSNP

Rendered fromsurvSNP.Rnwusingknitr::knitron Mar 10 2025.

Last update: 2023-01-25
Started: 2016-06-29

Citation

To cite package 'survSNP' in publications use:

The reference for the implementation approach in survSNP is:

Kouros Owzar, Zhiguo Li, Nancy Cox, Sin-Ho Jung. Power and Sample Size Calculations for SNP Association Studies With Censored Time-to-Event Outcomes. Genetic Epidemiology Volume 36, Issue 6, pages 538-548, September 2012 URL https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3592339/

Corresponding BibTeX entry: 

  @Article{,
    title = {Power and Sample Size Calculations for SNP Association
      Studies With Censored Time-to-Event Outcomes},
    author = {Kouros Owzar and Zhiguo Li and Nancy Cox and Sin-Ho
      Jung},
    journal = {Genetic Epidemiology},
    year = {Sep 2012},
    volume = {36},
    issue = {6},
    pages = {538--548},
    url = {https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3592339/},
  }