Package: submitr 0.1.0

Erwin Lares

submitr: Scaffold and Submit Computational Jobs to HTC Schedulers

Provides scaffolding tools to help researchers prepare and submit computational jobs to high-throughput computing (HTC) schedulers. Generates the files required to run containerized R analyses on 'HTCondor', including submit files and executable scripts, and wraps the system commands needed to stage files, submit jobs, monitor status, and retrieve results from a CHTC submit node. Provides 'htc_config()' for managing connection details and SSH connection reuse guidance. Works naturally alongside 'containr' for container image management and 'toolero' for dataset splitting and project scaffolding.

Authors:Erwin Lares [aut, cre]

submitr_0.1.0.tar.gz
submitr_0.1.0.tar.gz(r-4.7-any)submitr_0.1.0.tar.gz(r-4.6-any)
submitr_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
submitr/json (API)
NEWS

# Install 'submitr' in R:
install.packages('submitr', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/erwinlares/submitr/issues

Pkgdown/docs site:https://erwinlares.github.io

On CRAN:

Conda:

3.18 score 30 scripts 7 exports 25 dependencies

Last updated from:e0c1c00ae6. Checks:4 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK142
source / vignettesOK194
linux-release-x86_64OK139
wasm-releaseOK131

Exports:htc_confightc_downloadhtc_gen_executablehtc_gen_submithtc_statushtc_submithtc_upload

Dependencies:bitbit64clicliprcpp11crayongluehmslifecyclemagrittrpillarpkgconfigprettyunitsprogressR6readrrlangtibbletidyselecttzdbutf8vctrsvroomwithryaml

From the Notebook to the Cluster: Your First CHTC Job with submitr

Rendered fromfrom-notebook-to-cluster.Rmdusingknitr::rmarkdownon May 19 2026.

Last update: 2026-05-19
Started: 2026-05-19