Package: statgenQTLxT 1.0.3

Bart-Jan van Rossum

statgenQTLxT: Multi-Trait and Multi-Trial Genome Wide Association Studies

Fast multi-trait and multi-trail Genome Wide Association Studies (GWAS) following the method described in Zhou and Stephens. (2014), <doi:10.1038/nmeth.2848>. One of a series of statistical genetic packages for streamlining the analysis of typical plant breeding experiments developed by Biometris.

Authors:Bart-Jan van Rossum [aut, cre], Willem Kruijer [aut], Fred van Eeuwijk [ctb], Martin P Boer [ctb], Daniela Bustos-Korts [ctb], Emilie J Millet [ctb], Joao Paulo [ctb], Maikel Verouden [ctb], Ron Wehrens [ctb], Choazhi Zheng [ctb]

statgenQTLxT_1.0.3.tar.gz
statgenQTLxT_1.0.3.tar.gz(r-4.7-arm64)statgenQTLxT_1.0.3.tar.gz(r-4.7-x86_64)statgenQTLxT_1.0.3.tar.gz(r-4.6-arm64)statgenQTLxT_1.0.3.tar.gz(r-4.6-x86_64)
statgenQTLxT_1.0.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
statgenQTLxT/json (API)
NEWS

# Install 'statgenQTLxT' in R:
install.packages('statgenQTLxT', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

openblascppopenmp

2.70 score 3 scripts 220 downloads 1 exports 34 dependencies

Last updated from:e8a8806b23. Checks:6 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-arm64OK162
linux-devel-x86_64OK138
source / vignettesOK257
linux-release-arm64OK158
linux-release-x86_64OK156
wasm-releaseOK137

Exports:runMultiTraitGwas

Dependencies:clicodetoolscpp11crayondata.tabledotCall64enhancerfarverforeachggplot2gluegtableisobanditeratorslabelinglatticelifecycleLMMsolverMASSMatrixR6RColorBrewerRcppRcppArmadilloRcppProgressrlangS7scalessommerspamstatgenGWASvctrsviridisLitewithr

Multi-trait GWAS with the statgenQTLxT package

Bart-Jan van Rossum

Rendered fromstatgenQTLxT.Rmdusingknitr::rmarkdownon Jun 18 2026.

Last update: 2023-02-23
Started: 2023-02-23