Overview | Example
Package: stIHC 0.1.0
Catherine Higgins
stIHC: Spatial Transcriptomics Iterative Hierarchical Clustering
Spatial transcriptomics iterative hierarchical clustering ('stIHC'), is a method for identifying spatial gene co-expression modules, defined as groups of genes with shared spatial expression patterns. The method is applicable across spatial transcriptomics technologies with differing spatial resolution, and provides a framework for investigating the spatial organisation of gene expression in tissues. For further details, see Higgins C., Li J.J., Carey M. <doi:10.1002/qub2.70011>.
Authors:
stIHC_0.1.0.tar.gz
stIHC_0.1.0.tar.gz(r-4.7-any)stIHC_0.1.0.tar.gz(r-4.6-any)
stIHC_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
stIHC/json (API)
| # Install 'stIHC' in R: |
| install.packages('stIHC', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:89b39ea3ec. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 237 | ||
| source / vignettes | OK | 265 | ||
| linux-release-x86_64 | OK | 234 | ||
| wasm-release | OK | 153 |
Exports:stIHC
Dependencies:base64encbslibcachemcliclusterdigestevaluatefastmapfdaPDEfontawesomefshighrhtmltoolshtmlwidgetsjquerylibjsonliteknitrlatticelifecyclemagrittrMatrixmclustmemoisemimemisc3dplot3DR6rappdirsRcppRcppEigenrglrlangrmarkdownsasstinytexxfunyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Spatial Transcriptomics Iterative Hierarchical Clustering | stIHC |