Package: sparseBC 1.2
Kean Ming Tan
sparseBC: Sparse Biclustering of Transposable Data
Implements the sparse biclustering proposal of Tan and Witten (2014), Sparse biclustering of transposable data. Journal of Computational and Graphical Statistics 23(4):985-1008.
Authors:
sparseBC_1.2.tar.gz
sparseBC_1.2.tar.gz(r-4.5-noble)sparseBC_1.2.tar.gz(r-4.4-noble)
sparseBC_1.2.tgz(r-4.4-emscripten)sparseBC_1.2.tgz(r-4.3-emscripten)
sparseBC.pdf |sparseBC.html✨
sparseBC/json (API)
| # Install 'sparseBC' in R: |
| install.packages('sparseBC', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- lung - Lung cancer gene expression data
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 6 years agofrom:423615956a. Checks:OK: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 27 2024 |
| R-4.5-linux | OK | Oct 27 2024 |
Exports:image.matrixBCimage.sparseBCmatrixBCmatrixBC.BICsparseBCsparseBC.BICsparseBC.choosekrsummary.matrixBCsummary.sparseBC
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Fit sparse biclustering and matrix-variate normal biclustering | sparseBC-package |
| Image plot of an object of class 'sparseBC' or 'matrixBC' | image.matrixBC image.sparseBC |
| Lung cancer gene expression data | lung |
| MVN biclustering | matrixBC |
| Do tuning parameter (lambda) selection for MVN biclustering via BIC criterion | matrixBC.BIC |
| Sparse biclustering | sparseBC |
| Do tuning parameter (lambda) selection for sparse biclustering via BIC criterion | sparseBC.BIC |
| Do tuning parameter K and R selection for sparse biclustering via cross-validation. | sparseBC.choosekr |
| Plot an object of class 'sparseBC' or 'matrixBC' | summary.matrixBC summary.sparseBC |