Package: spStack 1.1.3

Soumyakanti Pan

spStack: Bayesian Geostatistics Using Predictive Stacking

Fits Bayesian hierarchical spatial and spatial-temporal process models for point-referenced Gaussian, Poisson, binomial, and binary data using stacking of predictive densities. It involves sampling from analytically available posterior distributions conditional upon candidate values of the spatial process parameters and, subsequently assimilate inference from these individual posterior distributions using Bayesian predictive stacking. Our algorithm is highly parallelizable and hence, much faster than traditional Markov chain Monte Carlo algorithms while delivering competitive predictive performance. See Zhang, Tang, and Banerjee (2025) <doi:10.1080/01621459.2025.2566449>, and, Pan, Zhang, Bradley, and Banerjee (2025) <doi:10.1214/25-BA1582> for details.

Authors:Soumyakanti Pan [aut, cre], Sudipto Banerjee [aut]

spStack_1.1.3.tar.gz
spStack_1.1.3.tar.gz(r-4.7-arm64)spStack_1.1.3.tar.gz(r-4.7-x86_64)spStack_1.1.3.tar.gz(r-4.6-arm64)spStack_1.1.3.tar.gz(r-4.6-x86_64)
spStack_1.1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
spStack/json (API)
NEWS

# Install 'spStack' in R:
install.packages('spStack', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/span-18/spstack-dev/issues

Pkgdown/docs site:https://span-18.github.io

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
Datasets:
  • sim_stvcPoisson - Synthetic point-referenced spatial-temporal Poisson count data simulated using spatially-temporally varying coefficients
  • simBinary - Synthetic point-referenced binary data
  • simBinom - Synthetic point-referenced binomial count data
  • simGaussian - Synthetic point-referenced Gaussian data
  • simPoisson - Synthetic point-referenced Poisson count data

On CRAN:

Conda:

openblascpp

4.38 score 24 scripts 545 downloads 18 exports 53 dependencies

Last updated from:bc3f2d6314. Checks:6 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-arm64OK185
linux-devel-x86_64OK199
source / vignettesOK288
linux-release-arm64OK183
linux-release-x86_64OK215
wasm-releaseOK175

Exports:candidateModelscholUpdateDelcholUpdateDelBlockcholUpdateRankOneget_stacking_weightsiDistposteriorPredictrecoverGLMscalesim_spDataspGLMexactspGLMstackspLMexactspLMstackstackedSamplerstvcGLMexactstvcGLMstacksurfaceplotsurfaceplot2

Dependencies:abindbackportsBHcheckmateclarabelclicodetoolscpp11CVXRdigestdistributionalfarverfuturefuture.applygenericsggplot2globalsgluegmpgtablehighsisobandlabelinglatticelifecyclelistenvloomagrittrMatrixmatrixStatsMBAnumDerivosqpparallellypillarpkgconfigposteriorR6RColorBrewerRcppRcppEigenrlangrstudioapiS7scalesscsslamtensorAtibbleutf8vctrsviridisLitewithr

Posterior Predictive Inference

Rendered fromposterior-predictive.Rmdusingknitr::rmarkdownon Jun 06 2026.

Last update: 2026-03-08
Started: 2025-07-12

Spatial Regression Models

Rendered fromspatial.Rmdusingknitr::rmarkdownon Jun 06 2026.

Last update: 2026-03-08
Started: 2025-07-12

Spatial-Temporal Regression Models

Rendered fromspatial-temporal.Rmdusingknitr::rmarkdownon Jun 06 2026.

Last update: 2026-03-08
Started: 2025-07-12

spStack: Bayesian Geostatistics Using Predictive Stacking

Rendered fromspStack.Rmdusingknitr::rmarkdownon Jun 06 2026.

Last update: 2026-03-08
Started: 2024-10-04

Technical Overview

Rendered fromtechnical_overview.Rmdusingknitr::rmarkdownon Jun 06 2026.

Last update: 2025-07-12
Started: 2025-07-12

Readme and manuals