Package: soptdmaeA 1.0.1
Dibaba Bayisa Gemechu
soptdmaeA: Sequential Optimal Designs for Two-Colour cDNA Microarray Experiments
Computes sequential A-, MV-, D- and E-optimal or near-optimal block and row-column designs for two-colour cDNA microarray experiments using the linear fixed effects and mixed effects models where the interest is in a comparison of all possible elementary treatment contrasts. The package also provides an optional method of using the graphical user interface (GUI) R package 'tcltk' to ensure that it is user friendly.
Authors:
soptdmaeA_1.0.1.tar.gz
soptdmaeA_1.0.1.tar.gz(r-4.7-any)soptdmaeA_1.0.1.tar.gz(r-4.6-any)
soptdmaeA_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
soptdmaeA/json (API)
| # Install 'soptdmaeA' in R: |
| install.packages('soptdmaeA', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:08425f88a4. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 129 | ||
| source / vignettes | OK | 200 | ||
| linux-release-x86_64 | OK | 130 | ||
| wasm-release | OK | 104 |
Exports:cmatbrcd.maefixparsoptd.maegraphsoptd.maemmenusoptd.maeprint.soptdmaeAprint.summary.soptdmaeAseqAoptbrcd.maeAseqDoptbrcd.maeAseqEoptbrcd.maeAseqMVoptbrcd.maeAsoptdmaeAsoptdmaeA.defaultsummary.soptdmaeA
Dependencies:clicpp11glueigraphlatticelifecyclemagrittrMASSMatrixpkgconfigrlangvctrs
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Computes the treatment information matrix | cmatbrcd.mae |
| Sets parametric values and initial design | fixparsoptd.mae |
| Creates the graphical layout of resultant sequential optimal design | graphsoptd.mae |
| Creates the main menu tcltk window | mmenusoptd.mae |
| Sequential optimal designs for two-colour cDNA microarray experiments | print.soptdmaeA print.summary.soptdmaeA soptdmaeA soptdmaeA.default summary.soptdmaeA |
| Internal functions | seqAoptbrcd.maeA seqDoptbrcd.maeA seqEoptbrcd.maeA seqMVoptbrcd.maeA soptdmaeA-internal |