Package: soptdmaeA 1.0.0
Dibaba Bayisa Gemechu
soptdmaeA: Sequential Optimal Designs for Two-Colour cDNA Microarray Experiments
Computes sequential A-, MV-, D- and E-optimal or near-optimal block and row-column designs for two-colour cDNA microarray experiments using the linear fixed effects and mixed effects models where the interest is in a comparison of all possible elementary treatment contrasts. The package also provides an optional method of using the graphical user interface (GUI) R package 'tcltk' to ensure that it is user friendly.
Authors:
soptdmaeA_1.0.0.tar.gz
soptdmaeA_1.0.0.tar.gz(r-4.5-noble)soptdmaeA_1.0.0.tar.gz(r-4.4-noble)
soptdmaeA_1.0.0.tgz(r-4.4-emscripten)soptdmaeA_1.0.0.tgz(r-4.3-emscripten)
soptdmaeA.pdf |soptdmaeA.html✨
soptdmaeA/json (API)
| # Install 'soptdmaeA' in R: |
| install.packages('soptdmaeA', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 8 years agofrom:81a9a94807. Checks:OK: 1 NOTE: 1. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Dec 19 2024 |
| R-4.5-linux | NOTE | Dec 19 2024 |
Exports:cmatbrcd.maefixparsoptd.maegraphsoptd.maemmenusoptd.maeprint.soptdmaeAprint.summary.soptdmaeAseqAoptbrcd.maeAseqDoptbrcd.maeAseqEoptbrcd.maeAseqMVoptbrcd.maeAsoptdmaeAsoptdmaeA.defaultsummary.soptdmaeA
Dependencies:clicpp11glueigraphlatticelifecyclemagrittrMASSMatrixpkgconfigrlangvctrs
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Computes the treatment information matrix | cmatbrcd.mae |
| Sets parametric values and initial design | fixparsoptd.mae |
| Creates the graphical layout of resultant sequential optimal design | graphsoptd.mae |
| Creates the main menu tcltk window | mmenusoptd.mae |
| Sequential optimal designs for two-colour cDNA microarray experiments | print.soptdmaeA print.summary.soptdmaeA soptdmaeA soptdmaeA.default summary.soptdmaeA |
| Internal functions | seqAoptbrcd.maeA seqDoptbrcd.maeA seqEoptbrcd.maeA seqMVoptbrcd.maeA soptdmaeA-internal |