Package: som 0.3-5.2
Jun Yan
som: Self-Organizing Map
Self-Organizing Map (with application in gene clustering).
Authors:
som_0.3-5.2.tar.gz
som_0.3-5.2.tar.gz(r-4.5-noble)som_0.3-5.2.tar.gz(r-4.4-noble)
som_0.3-5.2.tgz(r-4.4-emscripten)som_0.3-5.2.tgz(r-4.3-emscripten)
som.pdf |som.html✨
som/json (API)
| # Install 'som' in R: |
| install.packages('som', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- yeast - Yeast cell cycle
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 5 months agofrom:a56214b958. Checks:2 OK. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Feb 11 2025 |
| R-4.5-linux-x86_64 | OK | Feb 11 2025 |
Exports:filteringnormalizeqerrorsomsom.initsom.projectsom.trainsom.update
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Filter data before feeding som algorithm for gene expression data | filtering |
| normalize data before feeding som algorithm | normalize |
| Visualizing a SOM | plot.som |
| quantization accuracy | qerror |
| Function to train a Self-Organizing Map | som som.init som.project som.train som.update |
| summarize a som object | print.som summary.som |
| yeast cell cycle | yeast |